Gene Rpic_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2552 
Symbol 
ID6289369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2658102 
End bp2659409 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID642626125 
Productrecombination factor protein RarA 
Protein accessionYP_001900112 
Protein GI187929625 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGG CCGAGCGCCT CCGCCCCCAT TCCGCCGACG ATGTGATCGG CCAGCAGCAT 
CTGCTGGGGC CGGGCAAGCC GCTGCGCGTG GCCTTCGCCT CCGGCGAGCC GCATTCGATG
ATCCTCTGGG GCCCGCCCGG GGTGGGCAAG ACCACGCTGG CGCGGCTGAT GGCCAACGCG
TTTGACGCGG AATTCATCGC GCTGTCCGCC GTGCTGTCTG GCGTCAAGGA CATCCGCGAG
GCCGTGGAGC GTGCGGAGCA GTTTCGTGCC CACGGCCGCC GCACCCTTGT GTTCGTCGAC
GAGGTCCATC GCTTCAACAA AAGCCAGCAG GATGCCTTCC TGCCGCACGT GGAAAGCGGG
CTGTTCACCT TCATCGGCGC GACGACGGAA AATCCCTCGT TCGAGGTGAA CGGCGCATTG
CTCTCGCGTG CTGCGGTGTA CGTGCTCAAG AGCCTGTCGG ACGACGAGCT GAAGCAGCTT
GCCGAACGTG CACGTCAGGA GCTGGGCGGG CTGGAGTGGA CGCCCGCCGC ACTCGACGCC
ATCGTCGCGT CGGCCGACGG CGATGGCCGC AAGCTGCTCA ACAACATTGA AATTGTGGCC
CGCGCCGCGC GCGCGCAAGC GGATGGCGAT GCGGTGCCCG CCGTTGACGA GGCGCTGCTG
GCCTCTGCGC TGTCAGAAAA TCTGCGCCGC TTCGACAAGG GCGGCGACGC CTTCTACGAC
CAGATCAGCG CGCTGCACAA GTCCGTACGC GGCTCCGACC CGGACGGCGC GCTGTACTGG
TTCTGCCGCA TGCTCGATGG CGGCGCGGAC CCGCGCTATC TTGCGCGCCG CATCGTACGC
ATGGCGTGGG AAGACATCGG CCTGGCGGAC CCGCGCGCCG GGCGCATCAC GCTCGACGCC
GCGGAAACGT ACGAACGCCT GGGCTCGCCG GAAGGGGAGC TTGCGCTGGC CCAGGCGGTG
ATCTACCTGG CCATCGCGCC CAAGTCGAAC GCCGGCTACA ACGCCTACAA CGCGGCGCGG
GCCTTCGTCA GCCAGGACAA GTCGCGCAAC GTGCCCGTGC ACCTGCGTAA TGCGCCGACC
AAGCTGATGA AAGAACTCGG CTACGGCCAT GCCTACCGTT ACGCGCATGA CGAGCCCGAG
GCCTACGCCG CTGGCGAAAC CTACTTTCCC GACGATCTGC CCGCGCAGAA CTGGTACGTG
CCGACGCCGC GCGGCCTGGA AGGCAAGATT GGCGAGAAGC TGCGGCACCT GCGCGAGCTG
GATGCGCAGT GGCATGCCGA GCAGGACAAA TCCTCCCGCA ACAAATAA
 
Protein sequence
MPLAERLRPH SADDVIGQQH LLGPGKPLRV AFASGEPHSM ILWGPPGVGK TTLARLMANA 
FDAEFIALSA VLSGVKDIRE AVERAEQFRA HGRRTLVFVD EVHRFNKSQQ DAFLPHVESG
LFTFIGATTE NPSFEVNGAL LSRAAVYVLK SLSDDELKQL AERARQELGG LEWTPAALDA
IVASADGDGR KLLNNIEIVA RAARAQADGD AVPAVDEALL ASALSENLRR FDKGGDAFYD
QISALHKSVR GSDPDGALYW FCRMLDGGAD PRYLARRIVR MAWEDIGLAD PRAGRITLDA
AETYERLGSP EGELALAQAV IYLAIAPKSN AGYNAYNAAR AFVSQDKSRN VPVHLRNAPT
KLMKELGYGH AYRYAHDEPE AYAAGETYFP DDLPAQNWYV PTPRGLEGKI GEKLRHLREL
DAQWHAEQDK SSRNK