| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2520 |
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| Symbol | |
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| ID | 6287234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2632452 |
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| End bp | 2636207 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642626094 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_001900082 |
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| Protein GI | 187929595 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.136282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.803235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATT TCGTTGACAG GCTGCGCTTT TTCGTCACCG AGCGGCCAGC GTTCTCGGAT
GGACACGGGG CTGTCACAGA CGAAGACCGC AAGTGGGAAG AGGCATATCG CCAACGATGG
CAGCACGACA AGGTCGTCCG GTCCACGCAC GGGGTCAACT GCACAGGATC GTGCTCCTGG
AAGATCTATG TCAAAGGCGG CATCGTTACG TGGGAAACCC AGCAGACGGA TTACCCGCGC
ACGCGCCCTG ACATGCCGAA CCATGAGCCG CGCGGGTGTT CGCGCGGGGC GTCGTACTCC
TGGTACCTGT ACAGCGCAAA TCGGCTGAAA TATCCGATGG TGCGTAGCGC GCTCGTCAAG
CTTTGGCGCG AGCGCCGTGC GATCATGGAC CCGGTCCAGG CCTGGCAGTC GATCGTTGAA
GACGACACCG CGCGCCGCAG CTATCAGAGC CGCCGCGGCC TTGGCGGCTT TGTCCGTTCA
ACGTGGGACG AGGTCAACGA AATCGTTGCC GCCGCCAACG TCTACACCAT CCGCAAGTAC
GGCCCGGATC GCGTGGTGGG GTTTTCACCG ATCCCTGCTA TGTCGATGGT CTCGTACGCG
GCCGGCTCGC GCTATCTGTC GTTGATCGGC GGTGTGTGCC TGAGCTTCTA CGACTGGTAC
TGCGATCTGC CGCCCGCCTC GCCGCAAACC TGGGGCGAGC AGACCGACGT GCCGGAATCT
GCCGACTGGT ACAACTCGAC GTTCATCATG CTGTGGGGCT CGAACGTGCC GCAGACGCGC
ACGCCCGACG CGCACTTCAT GGTGGAAGCC CGCTACAAGG GCACGAAGAT TGTTTCGGTG
TTCCCTGACT ACGCCGAGGG CGCGAAGTTT GGCGACATCT GGCTGCATCC CAAGCAAGGC
ACCGACGCCG CACTGGCGCT CGCCATGGGG CACGTGATCC TCAAGGAATT CCACCTGGCG
GGCAAGAGCG ACTACTTCAT GGACTACTGC CGCCGCTTCA CCGACATGCC CTGCCTGGTG
CGGCTTGTGC GGCGCGGCGA CCAGTATGTG CCCGACAGGC TGGTGCGCGC ATCGGATTTT
GAAGGCGCGA TGGGCGAGGC GAACAACCCC GATTGGAAGA CCGTGATGAT CGACGAGCTG
TCGGGCAAGG TCGTCACGCC GGTCGGGTCG GTGGGGTTCC GCTGGGGGCA GAAAGACGGC
GAAGACAAGG GCAAATGGAA CCTCAAGTCG GAAGCGTCGT CAGGGGCGGT AATCGTTCCG
CAGCTTTCGC TTGCCAAGGC ATATGACGAA GTGGTCGACG TACTGTTTCC GTACTTCGGC
AATCGTGAAC ATCCGCACTT CAACCACACA GGGCATCCGT CGGAGTTGTC GCGCGCACTT
GGCGCACGCC GCCTGCAGAC GTGCGATGGC GAGATGCTGG CCGTAACGGT GTACGACCTG
TTTGTCGCCA ACTACGGCCT GGATCAGGGC CTGGGCGGTC GCGACATTGC GCAGAGCTAC
GACGATGACC TGCCATACAC GCCGGCTTGG CAGGAAGCCA TCACGGGCGT CAATCGGGCG
GATGTGATTT CGGTGGCGCG GCAGTTTGCC GAAAACGCGC ACAAAACCCA GGGCAAGTCC
ATGGTCATCA TCGGGGCCGG GATCAACCAT TGGTTCCACA TGGACATGGC GTACCGCGCG
ATCATCAACA TGCTGATCAT GTGCGGTTGC GTTGGCAAGT CGGGGGGCGG TTGGTCGCAC
TATGTGGGGC AGGAAAAATT GCGGCCGCAG ACCGGCTGGA CCGCGCTTGC ATTTGCGCTG
GACTGGCACC GGCCGCCGCG GCACATGAAC GCCACGTCAT TCTTCTACGC GCATACTGAC
CAATGGCGCT ACGACCCGAT GGATCCGACG ACGCTGCTAT CGTCGCTGGC CGACAAGTCG
CGCTTTCATG GCACGCCGAT CGACTACAAC GTGCGCGCAG AGCGCATGGG CTGGCTGCCG
TCGGCGCCGC AGTTGGCGGC GAATCCGCTG GACGTCGGCC GCAGCCTTGC CAGCACGGGC
GAAGCGCCCA GCGTCGTTGC GCGCGAGCTG GCCTCCGGTG CCTTGCACAT GGCCTGTGAA
GACCCAGACA ACCCGGTGAA CTTCCCGCGC AACATGTTTG TCTGGCGCTC GAACCTGCTG
GGGTCTTCCG GCAAGGGGCA CGAGTACTTT CTCAAGCATC TGCTGGGCGC GGTGCATGGT
GTGCAGGGCG AGGAAGTTGC CAAGAGCGGC GGCAAGCGCC CGGAAGAGAT CGCTTGGCAC
GACAACGCCC CGCAGGGCAA GCTCGATTTG CTGGTGACGC TGGACTTTCG CATGTCCACG
ACGTGCATGT ACTCCGACGT GGTGCTGCCC ACCGCGACGT GGTACGAGAA GGACGACATG
AACACGTCCG ATATGCACCC GTTCATTCAT CCGCTATCGG CGGCGGTGGA TCCGGCGTGG
CAATCGAAGA GCGATTGGGA AATCTTCAAG GGCATCGCCA AACGGTTCTC GGAGTTGAGC
GTTGGACATC TGGGCGTGGA GTGCGATGTG GTGCTGGCGC CCATCGCGCA TGACTCGCCG
GCAGAACTGG CGCAACCGTT CGACGTGGTC GACTGGAAGC GTGGCGAGTG TGATCCGGTG
CCAGGCAAGA CCATGCCTGC GGTGATTGCC GTCGAGCGCG ACTATCCAAA CACGTTCCAG
AAATTTACGT CGCTTGGCCC GCTGATGGAC AAACTGGGCA ATGGCGGCAA GGGCATTTCG
TGGGATACGA AAGACGAGGT CAAGCTGCTT GGCGACCTGA ACTACCGCGT TGACGATGCG
GGTTGCGCGA ACGGCCGGCC GCGCATAGAC ACGGCCATCG ATGCGGCGGA GGTCATCCTG
TCGCTTGCGC CGGAGACCAA TGGTGCGGTG GCCGTCAAGG CATGGCAAGC GGTGTCGGCC
ATGACGGGTA TTGAACACGC GCATCTGGCA GATGCCCGCG AGGACGAGAA GATCCGGTTC
CGCGACATCC AGGCGCAGCC ACGCAAGATC ATTTCTTCGC CAACGTGGAG CGGAATCGAG
TCGGAACACG TGTCGTACAA CGCGGGCTAT ACCAACGTGC ACGAGCTGAT TCCGTGGCGC
ACCATCAGCG GCCGTCAGCA GTTGTACCAG GACCACGCGT GGCTGCGCGC CTTTGGCGAG
TCCTTGTGCG TGTACAAGCC ACCCATCGAC ACGGGCAGTT ATGAAGCGAT GGTCGGCAAA
CGCTCGAACG GCAATCCGGA ACTGGTGCTC AACTTCATCA CGCCGCACCA GAAGTGGGGC
ATCCACAGCA CCTATACGGA CAACCTGCTG ATGCTGACCC TGTCGCGCGG CGGGCCGATC
GTGTGGATGG CAGAAGCCGA CGCCAAGCAG ATCGACATTG CCGACAACGA CTGGATCGAG
TGCTACAACG CCAACGGCGC GCTCTGTGCC CGTGCTGTGG TGAGCCAGCG CGTGCCGCGC
GGCATGGTCA TGATGTACCA CGCGCAAGAG AAGATCGTGA ACACTCCCGG CTCCGAAATT
ACCGGCACGC GGGGCGGCAT TCACAACTCG GTCACCCGCA TTGCCATCAA GCCGACCCAC
ATGATCGGCG GTTACGCACA ACTGTCTTAC GGGTTCAACT ACTACGGCAC GGTTGGATCG
AACCGCGATG AGTTCCTGAT CGTGCGCAAG ATGAAGCGGA TCGACTGGCT TGACGACACC
TCACCCGCCT CGTTGCCTGC AGGAGCGCGC TCATGA
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| Protein sequence | MSHFVDRLRF FVTERPAFSD GHGAVTDEDR KWEEAYRQRW QHDKVVRSTH GVNCTGSCSW
KIYVKGGIVT WETQQTDYPR TRPDMPNHEP RGCSRGASYS WYLYSANRLK YPMVRSALVK
LWRERRAIMD PVQAWQSIVE DDTARRSYQS RRGLGGFVRS TWDEVNEIVA AANVYTIRKY
GPDRVVGFSP IPAMSMVSYA AGSRYLSLIG GVCLSFYDWY CDLPPASPQT WGEQTDVPES
ADWYNSTFIM LWGSNVPQTR TPDAHFMVEA RYKGTKIVSV FPDYAEGAKF GDIWLHPKQG
TDAALALAMG HVILKEFHLA GKSDYFMDYC RRFTDMPCLV RLVRRGDQYV PDRLVRASDF
EGAMGEANNP DWKTVMIDEL SGKVVTPVGS VGFRWGQKDG EDKGKWNLKS EASSGAVIVP
QLSLAKAYDE VVDVLFPYFG NREHPHFNHT GHPSELSRAL GARRLQTCDG EMLAVTVYDL
FVANYGLDQG LGGRDIAQSY DDDLPYTPAW QEAITGVNRA DVISVARQFA ENAHKTQGKS
MVIIGAGINH WFHMDMAYRA IINMLIMCGC VGKSGGGWSH YVGQEKLRPQ TGWTALAFAL
DWHRPPRHMN ATSFFYAHTD QWRYDPMDPT TLLSSLADKS RFHGTPIDYN VRAERMGWLP
SAPQLAANPL DVGRSLASTG EAPSVVAREL ASGALHMACE DPDNPVNFPR NMFVWRSNLL
GSSGKGHEYF LKHLLGAVHG VQGEEVAKSG GKRPEEIAWH DNAPQGKLDL LVTLDFRMST
TCMYSDVVLP TATWYEKDDM NTSDMHPFIH PLSAAVDPAW QSKSDWEIFK GIAKRFSELS
VGHLGVECDV VLAPIAHDSP AELAQPFDVV DWKRGECDPV PGKTMPAVIA VERDYPNTFQ
KFTSLGPLMD KLGNGGKGIS WDTKDEVKLL GDLNYRVDDA GCANGRPRID TAIDAAEVIL
SLAPETNGAV AVKAWQAVSA MTGIEHAHLA DAREDEKIRF RDIQAQPRKI ISSPTWSGIE
SEHVSYNAGY TNVHELIPWR TISGRQQLYQ DHAWLRAFGE SLCVYKPPID TGSYEAMVGK
RSNGNPELVL NFITPHQKWG IHSTYTDNLL MLTLSRGGPI VWMAEADAKQ IDIADNDWIE
CYNANGALCA RAVVSQRVPR GMVMMYHAQE KIVNTPGSEI TGTRGGIHNS VTRIAIKPTH
MIGGYAQLSY GFNYYGTVGS NRDEFLIVRK MKRIDWLDDT SPASLPAGAR S
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