| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2517 |
|---|
| Symbol | |
|---|
| ID | 6289485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2629482 |
|---|
| End bp | 2630165 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642626091 |
|---|
| Product | respiratory nitrate reductase, gamma subunit |
|---|
| Protein accession | YP_001900079 |
|---|
| Protein GI | 187929592 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2181] Nitrate reductase gamma subunit |
|---|
| TIGRFAM ID | [TIGR00351] respiratory nitrate reductase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.189452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.673257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACT ACCTTCACGA ATTCCTGTAC GGCATCTATC CGTACATCTG CCTTGCGGTG
CTGCTGCTGG GCAGCCTGAT CCGCTTCGAT CGTGAGCAGT ACACGTGGAA GAGCGATACC
TCACAGATGC TGCGCAGAGG CACGTTACGC GTGGGCAGCA ATCTGTTTCA CTGGGGCATT
CTGGTAGTCG TGGTGGGGCA CTTTGCCGGG TTTCTCGCAC CGCATTGGAT GGTGTCACCC
TTCCTGTCGG CATCGGGGCA CCAGTTGCTG GCCATGGTGG GCGGGGGCGC GGCAGGCATC
GTCTCGATCA TCGGCCTGAC CATGCTGATA CATCGGCGGC TCTCGGACAC GCGCGTCCGG
CGCAACAGCC GCACTTGGGA CATCGTCATC GTGCTGATGT TGTGGGTGCA GCTCGCACTT
GGGCTCGGGA CCGTGGTGCT GTCGATGCGG CATATGGACG GCGCGCTGTT CGAGGTGCTG
ACCGACTACG TCAAGGGCGT GGTCACCTTC CGCCCTGGTA TCGCGCGCCT GCTCGATGGC
GTGCCGCTCA CGTATCAGTT GCACATCCTG CTCGGCTTCA CCATCTTTCT CGTGACGCCG
TTCACGCGGA TGGTCCATAT CTGGAGCGGC TTTGCGTCAC TGGCGTATCT GATCCGGCCG
TATCAGTTGG TGCGCAAGCG TTAA
|
|---|
| Protein sequence | MTDYLHEFLY GIYPYICLAV LLLGSLIRFD REQYTWKSDT SQMLRRGTLR VGSNLFHWGI
LVVVVGHFAG FLAPHWMVSP FLSASGHQLL AMVGGGAAGI VSIIGLTMLI HRRLSDTRVR
RNSRTWDIVI VLMLWVQLAL GLGTVVLSMR HMDGALFEVL TDYVKGVVTF RPGIARLLDG
VPLTYQLHIL LGFTIFLVTP FTRMVHIWSG FASLAYLIRP YQLVRKR
|
|---|
| |