Gene Rpic_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2515 
Symbol 
ID6289483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2627357 
End bp2628643 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content64% 
IMG OID642626089 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001900077 
Protein GI187929590 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.577453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCAC CAGGCGCAAC GAACAATCAG GCCGGCGCCC CGGCCATTTC GGCCCAAGCG 
TGGTCAGTGC TGCTGGCAAG CACGCTCGCG TTCATGGTCT GCTTTGTGGT GTGGATGATG
TTTGGCGTGA TCGGCGTCCA GTTGCGCGAA GATCTGAAGC TGAACGGCAC CGAGTTCGGG
TTGCTGACCT CCACGCCTGT GCTGACCGGA GCCCTGATGC GGCTGCCCCT GGGCGCGTGG
ACGGATCGTT TTGGCGGCCG CATCGTCATG ACCACACTGC TTGTCGTCTG CGCGGTGCCG
GTGTACGCCG TCAGCTACGC GACCGCGCTT TGGCAGTTTC TGGTGATCGG CCTGTTTCTC
GGCTGCGTCG GTGCGTCCTT CGCGGTCGGA ACCCCCTACG TTGCGCGCTT CTTTCCGCAG
GAGCGACGCG GTTTTGCGAT GGGGTTCTTT GGCGCCGGTA CGTCGGGCGC GGCCATCAAC
CTTTTTCTCA CGCCGTCGCT GCAGGCGGCT TACGGCTGGC GCTTCGTGCC GCGTGCGTAT
GCGGTTGCCC TGCTGGTGAC GGCGGTCATC TTCTGGCTGG CATCGGCGTC CGACCCGGGC
GCGGGGCGGG CGCAGGGGTC CTGGGTGGAC AGTTTCAAGG TGCTGCGTGA CCGGCGCGTC
TGGAGACTGT GCCAGTACTA CTCGATCACC TTTGGCGGGT TCACCGCCCT GTCGTTGTGG
ATGCCGCAGT ATCTGAAGAA TGAGTATGGG ATGACGCTGG TTGCGGCGTC GGCGTTTGCG
GCGGGGTTTT CGTTGCCTGG GTCGGTCCTG AGGGCCGTCG GTGGCTGGCT TGCCGATCGC
TGGGGCGCCC AGAACGTGAC CTGGTGGGGG CTGTGGGTCG CGTGGGTCTG CCTGTTCTTG
CTTGCGTATC CGCCGACCGA CCTCGCGATC CACACCATCG ACGGGGCATT CAATCTGCAT
CTGCAGATAC CGTTGGCGGC ATTCATTGCG CTGATCTTCC TGATGGGCAG CGTATTCGCC
TTCGGCATGG CGTCTACCTT CAAGTACGTG GCGGACGATT TCTCAGCAAA CATGGGGGTC
GTGACCGGTA TCGTCGGCCT GGCCGGCGGC CTGGGCGGGT TTCTCCTCCC CATCATCTTT
GGCGTCTTGT TGGACGTGTT CCGAGTGCGC TCGTCGTGCT TCATGTTCCT CTACGGCATC
GTGTGGGTGT CGCTGATCCT CCTCTACCTG TCGGAAGTGC GGCGGGCACC GCTGACGGGG
CACGCTGGGC AGGGGGCTGT CCAATAA
 
Protein sequence
MRAPGATNNQ AGAPAISAQA WSVLLASTLA FMVCFVVWMM FGVIGVQLRE DLKLNGTEFG 
LLTSTPVLTG ALMRLPLGAW TDRFGGRIVM TTLLVVCAVP VYAVSYATAL WQFLVIGLFL
GCVGASFAVG TPYVARFFPQ ERRGFAMGFF GAGTSGAAIN LFLTPSLQAA YGWRFVPRAY
AVALLVTAVI FWLASASDPG AGRAQGSWVD SFKVLRDRRV WRLCQYYSIT FGGFTALSLW
MPQYLKNEYG MTLVAASAFA AGFSLPGSVL RAVGGWLADR WGAQNVTWWG LWVAWVCLFL
LAYPPTDLAI HTIDGAFNLH LQIPLAAFIA LIFLMGSVFA FGMASTFKYV ADDFSANMGV
VTGIVGLAGG LGGFLLPIIF GVLLDVFRVR SSCFMFLYGI VWVSLILLYL SEVRRAPLTG
HAGQGAVQ