Gene Rpic_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2514 
Symbol 
ID6288322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2626967 
End bp2627302 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content62% 
IMG OID642626088 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_001900076 
Protein GI187929589 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.443195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC CACACGCCGC GCCCGGAGAG CTGATCGACG TCCGCCCACT GGGCGCTGCA 
CTCCAGCAAG CAAAATCCGT CGCCTTGATC CGCTCGACGC ACCTTGAAGT CATGCGACTC
GTGCTGCCTA CAGGCGGCCG TATTCCTGTC CATCAGGCGC CGGGAGAAAT CACGGTGCAG
TGCCTTGAGG GCGTGCTGAA GTTCGGCATG AACTCGGGCA CACACACCAT GCGCGCAGGA
GATCTTCTGC TGCTTCCACC GGAAGAACCG CATTGGCTGG AGGCGGTGGA AAGCGCGTCG
GTGCTCGTCA CCCTCTATCT TCCGCAGCGC CAATAG
 
Protein sequence
MATPHAAPGE LIDVRPLGAA LQQAKSVALI RSTHLEVMRL VLPTGGRIPV HQAPGEITVQ 
CLEGVLKFGM NSGTHTMRAG DLLLLPPEEP HWLEAVESAS VLVTLYLPQR Q