Gene Rpic_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2503 
Symbol 
ID6286849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2619400 
End bp2620311 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID642626079 
Productputative acyltransferase 
Protein accessionYP_001900067 
Protein GI187929580 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.725961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCGCG TCCTGCCTGC CTTTTTACTG GGCACGTTTA GCTCAATCCT GCTTGCCTTG 
AACACGCTGT TCTGGAGCGT GCCGCTGTTC ACGCTGTCAG CGTTCAAGCT GCTGGTGCCG
GCAGTGGCCG TCCGCCGACG GATCGACCCG ATGCTCAACT GGGTCGCAAC GCGCTGGATC
GGTTGCAACA ATGCCTGGAT CGGCGTGCTG CAACGTGAGC CGTGGAGCGT GGAAGGCGCC
GACAACCTGC GCTACGCGGG TTGGTACCTC GTCAATTGCA ACCATCGGTC TTGGGTGGAC
ATCTTCGTGT TGCAGCGGGT GTTGAACCGG CGCATCCCAC TGCTCAAGTT CTTCCTCAAG
CAACAGCTGA TCTACGTGCC GGTCATCGGC CTGGCCTGGT GGGCGCTGGA TTTTCCGTTC
ATGCGGCGGC ACTCCAAGGC GGCGCTGCGC AAGCACCCCG AGCTGCGCAA TCAAGATCGC
GAAACCACGC GTCGCGCCTG TGCCAAGTTC GCGCACGTGC CGACCAGCGT CATGAACTTT
GCCGAAGGCA CGCGGTACAC CCCGGCAAAG CACCGGACGC AGTCGTCCCC CTATCGCCAT
CTGCTCAAGC CGAAGGCCGG CGCCCTGGCC CTGACGCTCA ACGCCATGGG CGGAAGGTTC
CAGTCGCTGC TCGATATCAG CATCGCCTAT CCGGACGGCA CACCGAGCTT CTGGCAACTG
GCCTCCGGCC AGGCCGGCCG GGTGATGGTG CATATCCGCG AGCTGCCGAT CCCGCCGGAT
TTCTGCACGC ACGACTACAG CACCGACTCA GCCTTCCGCA GCGATTTCCA CCGCTGGCTC
ACCGAACTCT GGGAGGAGAA AGACCAGCAG ATCGAAAACA TGCTGGCGCA GGCAGCCAAC
CGCGTGGCGT AG
 
Protein sequence
MIRVLPAFLL GTFSSILLAL NTLFWSVPLF TLSAFKLLVP AVAVRRRIDP MLNWVATRWI 
GCNNAWIGVL QREPWSVEGA DNLRYAGWYL VNCNHRSWVD IFVLQRVLNR RIPLLKFFLK
QQLIYVPVIG LAWWALDFPF MRRHSKAALR KHPELRNQDR ETTRRACAKF AHVPTSVMNF
AEGTRYTPAK HRTQSSPYRH LLKPKAGALA LTLNAMGGRF QSLLDISIAY PDGTPSFWQL
ASGQAGRVMV HIRELPIPPD FCTHDYSTDS AFRSDFHRWL TELWEEKDQQ IENMLAQAAN
RVA