| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2489 |
|---|
| Symbol | |
|---|
| ID | 6289165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2603292 |
|---|
| End bp | 2604209 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642626065 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
|---|
| Protein accession | YP_001900053 |
|---|
| Protein GI | 187929566 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
|---|
| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0989131 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATAC TCAGGGTTCT CGGCTCGGCC GCCGGCGGCG GTTTCCCACA GTGGAACTGC
AACTGTCGCA ACTGCGACGG TGTGCGGCGC GGCACCGTGC GCGCCACGCC GCGCACGCAG
TCGTCCATCG CACTCGGCGA CGGCCAACAC AACTGGCTCG TGGTGAACGC CTCGCCGGAC
ATCCTCGCGC AACTGCGCAG TTCGCCAGCG CTGCAACCGG CACGCACGCC GCGTGATACG
GGCATCGTGG GCGTCGTGCT GATGGATGCG CAGATCGACC ATGTGACGGG CCTCTTGATG
CTGCGCGAAC ATCGGCAAGC GCTGCCCGTC TATGCCAGCG CAGCGGTCAT CAGCGATCTG
TCCACCGCCT TCCCCCTCAC CCGCATGCTG TCGCACTACT GCGGTCTCGA CACGCGCGCG
CTCGCGCTGG ACGGCACGGC GTTCTCGGTG CCCCCGCTCG ACGACGTGGC GTTGACGGCG
ATCCCGCTGG AGAGCAAGGC GCCGCCCTAC TCGCCCAGCC GCAACGCGCG CCGCGTGGGC
GACAACATCG GCCTGCGCAT CGTCGATCGC AAGAGCGGCC GGCGTGCATT CTACGCGCCG
GGTCTCGCCC GTGTCGAACC CCATGTGCTC GACGAAATGG GCGCGGCCGA CGTGGTGCTG
GTGGACGGCA CCTGCTGGCG CAACGACGAG ATGCTCGCCC TCGGTTTTTC CACCAAGACG
GCAGCAGACA TGGGCCACCT CGCGCAATCC GGCCCCGGCG GCATGATCGA CGTGCTCGAC
CAGCTGCCGG CCACGCGCAA GGTGCTGATC CACATCAACA ACACCAACCC GATCCTCGAT
GAAGACTCGC CGCAGCGCCG GGAGTTGGAA GCACACGGCA TCGAGGTGGC TTACGACGGC
ATGGAAATCT CGCTATGA
|
|---|
| Protein sequence | MTILRVLGSA AGGGFPQWNC NCRNCDGVRR GTVRATPRTQ SSIALGDGQH NWLVVNASPD
ILAQLRSSPA LQPARTPRDT GIVGVVLMDA QIDHVTGLLM LREHRQALPV YASAAVISDL
STAFPLTRML SHYCGLDTRA LALDGTAFSV PPLDDVALTA IPLESKAPPY SPSRNARRVG
DNIGLRIVDR KSGRRAFYAP GLARVEPHVL DEMGAADVVL VDGTCWRNDE MLALGFSTKT
AADMGHLAQS GPGGMIDVLD QLPATRKVLI HINNTNPILD EDSPQRRELE AHGIEVAYDG
MEISL
|
|---|
| |