| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2486 |
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| Symbol | |
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| ID | 6288428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2600022 |
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| End bp | 2602040 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642626062 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001900050 |
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| Protein GI | 187929563 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.141183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTC ACGCGGCAGC CGACCCGCGC GGTTCCGAAA ACGCCCCGGC CACGCTCGGT
GACACCCCGA ACGATCAGCC TGAACTGATC GCGCAATCCC ACGAGCGATC CAAGTCCTAC
GGCTTGCGCC CGTATGAGTC GCCCGACTTC TGCCCGGTCC TGCACAGCGA GCTGAAAACC
GAGATCGAGC GCAGCCAGTC GCTGTTCACG CACGCGCTCC CCGTGATGGA GACGCTCTAC
AGCCAGATCG TCAACACGCA AAGCATGGTG ATCCTGACCG ACACGTCTGG CCTGATCCTG
CATTCGCTGG GGGACGACGA TTTCCTGGCC CAGGCGAGCA AGGTGGCCCT TCAACCGGGC
GCGCTGTGGT CGGAAGCGAG CCGGGGCACC AACGCCATCG GCACGGCGCT GGCCGAGGCT
AAACCCACGC TGGTCCACGG CTCCGAGCAC TACCTGCAGG CCAATCAGTT CCTCACCTGT
TCGTGTGCGC CGATCTTCGA TCCGTACGGC GCCACCGTGG GTGCGCTCGA TGTGACGGGG
GACCATCGCG GTTTCCACAA GCACACCATG GCGCTGGTGC GCATGTCGGC GCAGATGATC
GAGAATCACT TGTTTGCCAA CACGTTCCAG GACGTGGTGT GCATCCACTT CCACTCGCGC
CCGGAATTCA TCGGCACACT GGTCGAGGGC ATTGCGGCCT TCACGCCGGC GGGGCGCTTC
CTGTCGGCCA ACCGCAGCGG CGAATTCCAG CTCGGCCTGT CGATCCGCGC GCTGCATGCC
CATACCTTTT CGTCGCTGTT TGGGCTGTCG ATGTCGCAGT TGATCGACCG CGAACGCACC
GCAGCGGCAG GTATCGTGCA GTTGCAACTG CCCAGCGGCG TGAAGGTGTT TGCGCGCGTC
GAATGGAAGC GGCCGGCCAA CCGCATGGTG GGCGGCGCGA TTGGCGCTGA TCTCTCGACT
GACCGCGACG CGGCGCCGCG CCGGGCCTAC ATCGAGCCGA TCCGGCAGCC GGCCAGCCTG
GAGGCGCTGG ACACCGGCGA CGCGCAGATC CAGACCGTCA TTGGCAAGCT GCGCAAGGTT
ATCGGCAAGG ATATCCCTGT CATGATCCTG GGCGAAACCG GCACGGGCAA GGAGCTGCTT
GCGCGCGCCA TCCACGCCGA CAGCCCGCGC CACGCCGGCC CCTTCATCGC CGTGAATTGC
GCGTCGATTC CGGAAGCGCT CATCGAATCT GAACTCTTCG GCTACGAAGA AGGCGCCTTT
ACCGGCGCGC GCAAGAAGGG CGGCATCGGC AAGATGGTGC TGGCCAACGG CGGCACGCTC
TTCCTCGACG AGATCGGCGA CATGCCGCTG CACCTGCAGG CCCGCCTGCT GCGCGCATTG
CAAGAGCGTG CGGTCTCTCC GCTGGGCAGC AACAAGCTGA TCCAGGTAGA TGTGACGGTC
GTGTGCGCCA CTCACCGCAA CATGCGCGAG ATGGTGGCCA GCGGCCAGTT CCGCGAAGAC
CTGTACTACC GGCTCAACGG TCTGGTCGTG CGCCTGCCGG CATTGCGCGA GCGCAGCGAC
CTCGACGTGG TAGCCGACAA GCTGCTGAAA CTTGAACAGG CCGACGCGCC CCCCATCAGC
GAAGCCGTGA TGCAGATGTT CCGCAGCTAC CACTGGCCCG GCAACATTCG CCAGCTCGGC
AATCTGCTGC GCACCGCCCG GCTGATGGCC GAAGGCGCTC CGGAAATCAC CGAAGACCAT
CTGCCCGACG ATTTTCTTGA AGACTGGCAG GCGCGTCATG GCGACCAGCC GTCTCCGGAC
AATGCGGTGG CATCGGCAGC GGCTGTACCG CCTGTCACTC AAAACGTGGG CGGCACGCAG
CCCAAGCGGC TTGCCGATGT GGAAAGCATG ACGATCATGG CGGCCGTGCA GGCGCACAAC
GGCAACATTT CCGCCGCTGC GAAAGCGCTC GGCATTTCGC GCAACACAAT CTACCGCCGG
ATCGACGAGG CCGGCGGCTT GCCTTCAGAC ACCGACTGA
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| Protein sequence | MTPHAAADPR GSENAPATLG DTPNDQPELI AQSHERSKSY GLRPYESPDF CPVLHSELKT
EIERSQSLFT HALPVMETLY SQIVNTQSMV ILTDTSGLIL HSLGDDDFLA QASKVALQPG
ALWSEASRGT NAIGTALAEA KPTLVHGSEH YLQANQFLTC SCAPIFDPYG ATVGALDVTG
DHRGFHKHTM ALVRMSAQMI ENHLFANTFQ DVVCIHFHSR PEFIGTLVEG IAAFTPAGRF
LSANRSGEFQ LGLSIRALHA HTFSSLFGLS MSQLIDRERT AAAGIVQLQL PSGVKVFARV
EWKRPANRMV GGAIGADLST DRDAAPRRAY IEPIRQPASL EALDTGDAQI QTVIGKLRKV
IGKDIPVMIL GETGTGKELL ARAIHADSPR HAGPFIAVNC ASIPEALIES ELFGYEEGAF
TGARKKGGIG KMVLANGGTL FLDEIGDMPL HLQARLLRAL QERAVSPLGS NKLIQVDVTV
VCATHRNMRE MVASGQFRED LYYRLNGLVV RLPALRERSD LDVVADKLLK LEQADAPPIS
EAVMQMFRSY HWPGNIRQLG NLLRTARLMA EGAPEITEDH LPDDFLEDWQ ARHGDQPSPD
NAVASAAAVP PVTQNVGGTQ PKRLADVESM TIMAAVQAHN GNISAAAKAL GISRNTIYRR
IDEAGGLPSD TD
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