| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2484 |
|---|
| Symbol | |
|---|
| ID | 6288426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2598292 |
|---|
| End bp | 2599173 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642626060 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_001900048 |
|---|
| Protein GI | 187929561 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0989131 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCC GTATTCGGTT GACCGCGGTT GGGGCTTTCC GTCGCCTTGC CGGCCTCCTG
CTTGCTGCGG CAGCCATGAT GGTGAGCGCC GCGCCGGCAC ATGCCGACAT GGCGAAGATC
CGCCAGAGCG GTGCCCTGAA GGTCGCGCTG TACAAGGGCC TGCCGCCGTT CTCCGACAAC
GTCGGGGGCC AGTTCAGCGG CATTGACGTG GCGCTTGCCA ATGCGCTTGG CAAGCAGATG
GGGCTGTCGG CGTCGTTGCT GCCGTTTGAT GCGGATGACG ATGGCATGTC GGGCGACCTG
CGCAACATGG TCTGGAAAGG GCACTACCTG GGGTATGGCC CGGCCGACGT GATGCTCCAT
GTGCCGGTTG ACCCGAACTT CATTCGCCAG AACGACCAGG TGCTGATATT CGCGCCGTAC
CTTCGCGAAG GCTATGTGCT GGTGTACGAC AGCGACCGCG TCCGCAAGGT CAGCAGCTTC
GAAGACCTCG CCGGTCAGGC GACCGGCGCC GAGCAGGGAT CGGGCGGGGC GAGTGCGCTG
CTTTCCAGTG CCAACGGCGC GCTGCGCGAC AAGGTGAAGA TCTATCCGGA GGCCAACGAG
GCGCTGCGTG CGCTGTTCTC CGGCCAGATT GCCGCGGCAA TGGTGACGCG GGCGCAATAT
GAAAATGCGC TGAAGATGCA GAATCAATCT GCCACACGGT TCGTGGCGAC CGAATTGCAG
TCGCCGCTGC TGCCGGCCCG CGGTTGGGCG ATCGGCATGG CCGTCAAGGC GGATCAGCGA
GAACTGGCGC AGGCGCTGGA GACCGCGCTC AATGCACTGC GCGCCAGCGG CGAGCTGCAA
CGCATCTTTG CGCAATACGG CGTGTCGATG GTGGCACCGT AG
|
|---|
| Protein sequence | MNARIRLTAV GAFRRLAGLL LAAAAMMVSA APAHADMAKI RQSGALKVAL YKGLPPFSDN
VGGQFSGIDV ALANALGKQM GLSASLLPFD ADDDGMSGDL RNMVWKGHYL GYGPADVMLH
VPVDPNFIRQ NDQVLIFAPY LREGYVLVYD SDRVRKVSSF EDLAGQATGA EQGSGGASAL
LSSANGALRD KVKIYPEANE ALRALFSGQI AAAMVTRAQY ENALKMQNQS ATRFVATELQ
SPLLPARGWA IGMAVKADQR ELAQALETAL NALRASGELQ RIFAQYGVSM VAP
|
|---|
| |