Gene Rpic_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2477 
Symbol 
ID6289217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2592623 
End bp2592979 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content67% 
IMG OID642626053 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_001900041 
Protein GI187929554 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.333736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGAGG CCTTGGCCGA TATTTCGCCC GACCTCGGCC GCTACGTCGT CGAGTTCGGC 
TTTGGCGACG TCTATAGCCG CCCGGGGCTG ACGCTGCGTG AGCGCGAGAT CGCCACCATT
GCCGCGCTCA CGGCGCTGGG CAACGCGGCA CCGCAGTTGA AGGTGCACAT TGCGGCGGGC
CTCAACGTGG GGCTCACGCG AAAGGAGATC ACCGAGACGA TCCTGCAGAT GGCGCTATAC
GCGGGCTTTC CGGCGGCACT CAACGGCATG TTTGCCGCCA AGGAAGTGTT TGCCGCTCAC
GACGCCGAGG GCGCGGCCGC CGCGAGCGGA TCGATGCGCC GCGAAACCAG CAACTGA
 
Protein sequence
MVEALADISP DLGRYVVEFG FGDVYSRPGL TLREREIATI AALTALGNAA PQLKVHIAAG 
LNVGLTRKEI TETILQMALY AGFPAALNGM FAAKEVFAAH DAEGAAAASG SMRRETSN