Gene Rpic_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2471 
Symbol 
ID6287638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2581909 
End bp2583384 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content68% 
IMG OID642626049 
Productputative transmembrane protein 
Protein accessionYP_001900037 
Protein GI187929550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCG AGTCGACAGG TTCCGCCCAA TCGGCCGGCC GCGCCGCCGC CGATGCGCGC 
GCCCAGGGTG GGCGAACCGA GCGCCGGCGC AACGCGCAAG GCATTGGCGC GTCGACCGGG
TATGGGCGCC TGATTGCGCC CGCCGTGTCC AGCCCGAGCG CTGCGCTCGA AACGCTGGGC
GCGGTGGTGG CGGCTATCGG CATCGTCTGG CTGTTCGCGC CGGACAATCC GCTGCTGCTC
GGTTACGGTT TTCCGTGGAT CTGGCTGGTG CCGCTCATCC TGGCGCTGCG CTACGGCACG
CTGCTCGGCG CGCTGGCCGC GCTGGTGGTG TTGGGCGCCT GGGCCGTGTT TTACGGACAG
ACGGCCGCCG CCGGCAGCTT CCCGCGCATG TACTTCCTGG GCGGCCTGAT GCTGGTGTTG
ATTGGCGGGC AGTACGGCGA CATATGGGGC GCGCGGTTGT CGCGTGCCCG CACCGTCAAT
GGTTATCTGA ACGACCGGCT GGCAGCGCTC ACCAAGAACC ACTTCCTGCT GCGCCTCTCG
CACGAGCGCC TGGAGAACGA TCTGCTGGCC AAGCCGACCA CGCTGCGCGA CACGCTCACG
CAGCTGCGCA ATATTGCGCT GGCTGCGCGC GAGCACGGCA CAGCCGAGAA CGCGCCTGAC
GTGGCGCAAC TGCCTGGCGC CGAGCCGTTC CTGCAATGGA CGGCGCAGGC CTGCCAGCTG
GAAGTGGCGG CCATGGTGCG CGTGACGGGC AACCGCATCG ACACCGAACC GGTGGCCCGC
GTCGGCACGC CGTTCGACAT CGTTGCCGAT GATCCGTTGA TCCGCCATTG CATCGACACC
CACACGCTCG GTCACCCGCA GGCGCCCGAG CTGCGGAATG TGAACAACCC CGAAGAGAGC
TCGCGCTACG TGGCGTGCGC GCCCGTGCTG TCGGGTGCGG ACGAGCTGAT CGGCCTGGTC
GTCGTGCACC AGATGCCGTT CCTCTCGCTG TCGTACGAGA ACCTGCAGTT CCTGCTGGTG
CTGCTTGGCT ACTACGCCGA CGGCGTGCGC CATCTCACCG TCAGCTCCGA GATTCTGGAT
CTCGTGCCCG ACGCGCCGTA CGAGTTTGCG CTCGACCTCG GCCGGCTGGC GCGCCTGCAT
CGCGATACCG GCATCGATTC GTCGGTGGTG GCGCTCATCT TTGACCAGGA AGAGGCCAGC
GATGCGCTGT TCGAGAGCGT GGTGCGCAGC CGCCGCGCGC TGGACGTCGT CTGGCAGGCG
AGCGGCAAGG GCCGCCGCGC CATCATCACG CTGATGCCGC TGTCGGGCGC GGGTGCCGTG
TCGGCCTATC TGGTGCGCAT TGAAGACAGC CTGCGTGCGC AGTTCGGCGT CGATTTCGAG
GGCGGGCACA TCAGCGTGCA GACGTTGCAT GTGACCGGCG AGCATCCGGG CGAAGCGCTG
CAGCGCTTCC TCTCGCGCTG CCATCTCGAT GCATAG
 
Protein sequence
MKTESTGSAQ SAGRAAADAR AQGGRTERRR NAQGIGASTG YGRLIAPAVS SPSAALETLG 
AVVAAIGIVW LFAPDNPLLL GYGFPWIWLV PLILALRYGT LLGALAALVV LGAWAVFYGQ
TAAAGSFPRM YFLGGLMLVL IGGQYGDIWG ARLSRARTVN GYLNDRLAAL TKNHFLLRLS
HERLENDLLA KPTTLRDTLT QLRNIALAAR EHGTAENAPD VAQLPGAEPF LQWTAQACQL
EVAAMVRVTG NRIDTEPVAR VGTPFDIVAD DPLIRHCIDT HTLGHPQAPE LRNVNNPEES
SRYVACAPVL SGADELIGLV VVHQMPFLSL SYENLQFLLV LLGYYADGVR HLTVSSEILD
LVPDAPYEFA LDLGRLARLH RDTGIDSSVV ALIFDQEEAS DALFESVVRS RRALDVVWQA
SGKGRRAIIT LMPLSGAGAV SAYLVRIEDS LRAQFGVDFE GGHISVQTLH VTGEHPGEAL
QRFLSRCHLD A