Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2467 |
Symbol | |
ID | 6289819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2576137 |
End bp | 2577405 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642626045 |
Product | D-amino acid dehydrogenase small subunit |
Protein accession | YP_001900033 |
Protein GI | 187929546 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATCG CAGTAGTCGG CGCCGGCATC ATCGGCATCA GCACGGCCCA TGCGCTGGCT CAGGAAGGCC ATCAGGTCAC CCTGGTCGAG CGCCATCCGG GCCCGGGCGA GGGCACCAGT TATGCCAACG GCGGCCAGTT GAGCTACAGC TATGTGGCGC CGCTGGCCGG CCCCGGCGTG CTTTCGCATG TGCCGGGCTG GCTGTTGCGT CGCGATTCGC CGCTGCGGCT GAAGCCATCG CTGGACCCGG CGTTGCTGCG CTGGGGGCTG CGCTTCATCG CGGCCTGCAA TCGTGACCGT GCCGACCGCA CCACGCGCGA GCTGCTTGCG CTGTCGTTCT ACAGCCGCGC ACGCATGGAA GCGTTGCGGG AGGCGTCGCC GGATCTGGCG TTCAGCTTTG CGCGCCGCGG CAAGCTGGTG GTGCATCGCG AGGCTGCGGC GTTTGAATCG GCCCGCGCGC AGGTCGGCTA TCAGGCGACG CTCGGCTGCG AGCAGCATGC ATTGTCCGCC GACGAAACGG TGGCCCACGA GCCCGCGCTT GCCGGCGCGC GTGACCAGAT CGTGGGCGCC ATCTACACGC CCGACGAAGA CGTGGCCGAT TGTCACCAAC TCTGCGTCGG CCTGTTCAAC CGGTTGCGCG CGATGCCAAA CGTGACGCTG CGTTTCAATA CCGGCGTAGA TGCGTTGTGG ACCGAAGGCC GCCGCGTGCG CGGTCTCCAT CTGGCAGATG GCGAGCAGGT TGCCGCCGAT GCGGTGGTGA TGGCAGCGGG CGTGACGAGC GCCAGGCTGC TCAGCCCATT GCGCATCGAC CCGGGGCTGT ATCCGCTCAA GGGTTACAGC ATCAGCCTGC CGCTGGAGGA GGGCGATGTT GCCCCGTTGA TCAGCGTGAC GGATGCGGCG CGCAAGATCG TCTATGCCCG CATTGGGCAG ACGCTGCGTG TGGCGGGCAT GGCGGATCTG GTGGGCTGGT CAACGGCGCT GGATACGCGC CGCGCCCAGA CGTTGTATGA CGAAACCCGC GCGCTGTTTC CGGGCGCCAT GCGCGCCAAT GACGCGGGTG CCGATGCGGC GCCGTGGGCT GGCATGCGGC CTGCAACGCC AACGGGCGTG CCCGTGGTGG GGGCGTCGCC GGTGCAAGGG TTGTGGCTGA ACGTGGGCCA TGGTGCGCTG GGCTTTACGC TAGCGCTGGG CAGTGCGGGC TTGCTGGCCG ATCTGATTGC CGGCCGCAAG CCCGCGATTT CCCCAGTGCC CTATGCGCTG GCCGCGTGA
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Protein sequence | MQIAVVGAGI IGISTAHALA QEGHQVTLVE RHPGPGEGTS YANGGQLSYS YVAPLAGPGV LSHVPGWLLR RDSPLRLKPS LDPALLRWGL RFIAACNRDR ADRTTRELLA LSFYSRARME ALREASPDLA FSFARRGKLV VHREAAAFES ARAQVGYQAT LGCEQHALSA DETVAHEPAL AGARDQIVGA IYTPDEDVAD CHQLCVGLFN RLRAMPNVTL RFNTGVDALW TEGRRVRGLH LADGEQVAAD AVVMAAGVTS ARLLSPLRID PGLYPLKGYS ISLPLEEGDV APLISVTDAA RKIVYARIGQ TLRVAGMADL VGWSTALDTR RAQTLYDETR ALFPGAMRAN DAGADAAPWA GMRPATPTGV PVVGASPVQG LWLNVGHGAL GFTLALGSAG LLADLIAGRK PAISPVPYAL AA
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