Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2458 |
Symbol | |
ID | 6288616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2568500 |
End bp | 2569162 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626036 |
Product | 3-oxoacid CoA-transferase, B subunit |
Protein accession | YP_001900024 |
Protein GI | 187929537 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.931642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG AAACTACCGC CAAGATCCAG CGCTGGACGC GCGATCAGAT CGCTACGCGT GTGGCGCGCG ATATTCCCGA TGGTTCGGTC GTCAACCTGG GCATCGGCCT GCCGACGCTG GTGGCGAACC AACTGCCGGC CGATCGCGAA ATCATTCTGC ACACCGAGAA CGGCCTGCTC GGCATGGGTC CCGCGCCTGC GCCCGGGCAA GAAGACGAGG ACCTCATCAA CGCTGGCAAG CAGCCGGTCA CCATCAAGCC TGGTGCATCG TTCTTCCATC ATGCTGATTC GTTTGCCATG ATGCGGGGTG GCCATCTCGA CTATTGCGTG CTCGGTGCCT TCCAGGTGTC GGCCACGGGC GATCTGGCCA ACTGGCACAC CGGTGCCCCG GACGCGATTC CTGCCGTGGG CGGCGCGATG GATCTGGCCA TCGGTGCCAA GCGCGTCTTC GTCATGATGG AGCACCAGAC CAAGCAGGGC GAAAGCAAGA TCGTGCCGTC GTGCACGTAC CCGCTGACGG GCATTGGATG TGTCGATACC ATCTACACCG ACCTCGCTGT GATCGACATC ACGCCCGAGG GGCTGGTGGT GCGCGAGATG GCCGACGGCC TCGATTTCGA TACGCTGCAG ACGATGACGG CGGCGCCGTT GCGTCGTGCC TAG
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Protein sequence | MSAETTAKIQ RWTRDQIATR VARDIPDGSV VNLGIGLPTL VANQLPADRE IILHTENGLL GMGPAPAPGQ EDEDLINAGK QPVTIKPGAS FFHHADSFAM MRGGHLDYCV LGAFQVSATG DLANWHTGAP DAIPAVGGAM DLAIGAKRVF VMMEHQTKQG ESKIVPSCTY PLTGIGCVDT IYTDLAVIDI TPEGLVVREM ADGLDFDTLQ TMTAAPLRRA
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