Gene Rpic_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2452 
Symbol 
ID6287619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2562699 
End bp2563733 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content64% 
IMG OID642626030 
Productinner-membrane translocator 
Protein accessionYP_001900018 
Protein GI187929531 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC TGCAGCAATT GAGGCGGTCT GCACGGCCTG TTGAGGGCTC TGCGGCGCAT 
GGGTTGCCGC AAGCGCGTTG GTCGCCGTTT GAGATCGCGT TCTGGTGCGT GCCGATCGCG
GTGTTCTTTC TTCTTCCCGA TTACCTCGTC TTCGGCAGCC AGGTGTTGAT CGTCGGGCTG
TTTGCGTTGT CGCTCGACCT GGTGCTCGGC TATGCGGGCA TCGTGTCGCT CGGACATGCA
GGCTTCTTCG GGCTTGGCGC CTATACCGCC GGACTGCTCG CGGCACATGG CTGGGGTGAA
CCGCTCACCG GTCTGGCCGC GGGCGCTGTC GTCGCTGCGC TGGCCGGCTT CTGTGTGAGC
TTTCTCGTCG TGCGCGGGCA GGATCTGACA CGACTGATGG TCACGCTCGG CATCGGTCTG
ATGCTGTATG AGGCGGCCAA CAAGATGGCG TTTCTCACGG GCGGTGTGGA CGGCCTTTCC
GGTGTGGCGA TGCGCAACCT GCTCGGCACA TTTGAGTTCG ATCTGGAGGG GCGCACGGCT
TACTTCTATA GCTTGGTCGT GCTGTTTCTG GTGTTTGTGG GGTTGCGTCG CCTGGTGCGC
TCGCCGTTTG GGTTGTCGCT GCGCGGCATT CAACAGGGGC CGAAGCGCAT GCCGGCTATC
GGCGCGAATG TTCGCATGCG GCTGGTGGCG GCGTTCACCG TCAGCGCAGC GATTGCCGGT
GTCGCAGGCG GGCTGCTCGC GCAGACCACG CAATTTGTCG GTCTGGATTC GCTGGGCTTC
TCGCGCTCGG CAGAGTTGCT GATCATGCTC GTGCTGGGCG GTGCAGGCCG GTTGTACGGC
GCGTTGATTG GCGCAGCGGT GTTCATGATT GCGCAGGACG TGTTGGCCGG CATCAATCCC
GTCTACTGGC AGTTCTGGAT CGGCCTGCTG CTGATGGTGA TCGTGTTGTT TGCGCGGGGT
GGCATTCTCG GTGGGCTGGA AACTGCGGTG TCTGCGGTCA GGGCGCGGCG CGCTCGCAAG
GGAGGTGCTT CATGA
 
Protein sequence
MSGLQQLRRS ARPVEGSAAH GLPQARWSPF EIAFWCVPIA VFFLLPDYLV FGSQVLIVGL 
FALSLDLVLG YAGIVSLGHA GFFGLGAYTA GLLAAHGWGE PLTGLAAGAV VAALAGFCVS
FLVVRGQDLT RLMVTLGIGL MLYEAANKMA FLTGGVDGLS GVAMRNLLGT FEFDLEGRTA
YFYSLVVLFL VFVGLRRLVR SPFGLSLRGI QQGPKRMPAI GANVRMRLVA AFTVSAAIAG
VAGGLLAQTT QFVGLDSLGF SRSAELLIML VLGGAGRLYG ALIGAAVFMI AQDVLAGINP
VYWQFWIGLL LMVIVLFARG GILGGLETAV SAVRARRARK GGAS