| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2450 |
|---|
| Symbol | |
|---|
| ID | 6287617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2561235 |
|---|
| End bp | 2561936 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642626028 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001900016 |
|---|
| Protein GI | 187929529 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAC TGTTGTCGCT CGAAAATGTG ACCGCCGGCT ACGGCAATGC TGTCGTGCTG
GACGATGTGT CGTTCGCGCT CGAAGCAGGC GGCAGCCTTG CGCTGCTGGG CCGCAATGGT
GTCGGCAAGA CCACGCTGCT CGCCACGCTG ATGGGCTTCA CGCGCCTGCA CGGCGGGCGT
ATCCGCTGGC TGGGCGCGGA TATCGCCAAG ATGCCGCCAC ACCGGCGTGC CCGCGCAGGG
CTCGGCTGGG TGCCGCAGGA GCGGTGGATG TTTCCGTCGC TGACGGTGGA AGAGCATCTG
ACAGCCGTGG CGCGACCCGG GGCCTGGGAT GTGGCGCGCG TCTACAAGAC GTTTCCGCGC
CTTCAAGAGC GGCGCCGCAA TCTCGGCAAT CAGCTCTCAG GCGGCGAGCA GCAGATGGTC
GCCATCGCTC GCGCGCTGAT GACGAATCCC GCACTGCTGC TGTTGGATGA ACCGATGGAA
GGCCTCGCAC CGATCATCGT GCAGGAGCTT GGCCGCGCTA TCCGCGCGCT CGTTGAGGAG
GGGGGTATGG CGGTGATCCT GGTGGAGCAG CATGCGCGTC TGGCGCTGCA GCTCACGCAG
CGTGCGCTGG TGCTCGATCG AGGCCGCGTC GTGCACGCAT CAGCCAGCGC CGATCTGCTG
GCCGATGCGC CGTTACTGCA ACGGCTCGTG GCTGTTGCGT AG
|
|---|
| Protein sequence | MRELLSLENV TAGYGNAVVL DDVSFALEAG GSLALLGRNG VGKTTLLATL MGFTRLHGGR
IRWLGADIAK MPPHRRARAG LGWVPQERWM FPSLTVEEHL TAVARPGAWD VARVYKTFPR
LQERRRNLGN QLSGGEQQMV AIARALMTNP ALLLLDEPME GLAPIIVQEL GRAIRALVEE
GGMAVILVEQ HARLALQLTQ RALVLDRGRV VHASASADLL ADAPLLQRLV AVA
|
|---|
| |