Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2440 |
Symbol | |
ID | 6287659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2547460 |
End bp | 2549820 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642626018 |
Product | UvrD/REP helicase |
Protein accession | YP_001900006 |
Protein GI | 187929519 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.605331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC TGCTCGCCAA TCTGAACCCC GAACAACGCG CTGCCATCAC GCTTCCCGAT GAATCGGCGC TGATCCTGGC GGGCGCAGGC AGCGGCAAAA CGCGCGTGTT GACCACCCGC ATCGCGTGGC TGATCCAAAG CGCGCGGGTG TCGCCGTCGG GTGTGCTGGC CGTCACGTTT ACGAACAAGG CAGCCAAGGA AATGACGGCC CGCCTGCAGG CCATGCTGCC GATCAACACG CGCGCCATGT GGATCGGCAC GTTCCACGGT CTGTGCAACC GGTTGCTGCG CGCGCATTAC CGCGATGCCG GCCTGCCGCA GACGTTCCAG ATTCTGGATA CGCAAGACCA GCTCTCCGCC GTCAAGCGCC TGCTCAAGTC GCTCAATATC GACGACGAGA AATTCCCGCC CAAGAACGTC CAGTACTTCA TCAACGGGGC CAAGGAGCAG GGCCTGCGCG CGGGCGATCT GGAAATCGCC AACGAGTACG ACCGGCGCAT GGCCGATCTC TACGCCGCTT ACGACGCGCA ATGCCAGCGC GAAGGCGTGG TCGATTTTGC CGAGCTGCTG CTGCGCTGCT ACGAACTGCT GCGCTACAAC GACGCCATCC GTGCGCACTA CCAACGGCGT TTCAAGCACA TCCTGGTGGA CGAGTTCCAG GATACGAACA AGCTGCAATA TGCGTGGCTG AAGATTCTGG CCGGCCTGGG CGAGCCCGGC GTCACGCCCA ACGCCATCTT TGCCGTGGGC GACGATGACC AGAGCATCTA CGCGTTTCGT GGTGCCAATG TCGGCAACAT GGTCGACTTT GAACGCGAAT TCCGCGTCGA GCACCGGATC AAGCTGGAGC AGAACTACCG CTCGCATGGC CATATCCTCG ATACCGCCAA CCACCTGATC TCGCACAACA CGCGTCGGCT GGGCAAGAAC CTGCGCACGG ACGCCGGCCA CGGTGAGCCG GTGCGCGTCT ATCAGGCCGC GACGGACGGG CAGGAGGCGG GCTGGATTGT CGATGAGATC CGCGACCGTA TTGCGACCGG CATGTCGCGC TCGGAAATCG CCATCCTGTA TCGCAGCAAC GCGCAGTCGC GGGTGATCGA ACACGCGCTG TTCTCGGCAG GCATCCCGTA CAAGGTGTAC GGCGGCCTGC GCTTTTTCGA GCGTGCGGAA ATCAAGCACG CGCTGGCGTA TCTTCAGCTT CTTGAGAATC CCGACAATGA CGCGGCGTTT GGTCGCGTGG TGAATTTCCC GGCGCGTGGC GTCGGGGCTC GTTCGCTCGA GCAGTTGCAG GATGCGGCGC GGCTGTATGG CATTTCGCTC GCAGCGGCGG TGCCGTACCT CACGGGGGCA GCAGGCACCA AGCTGTCGGC GTTTGTGCGT CTGATCGAAC AGATGCGTGC CGACACGCGC CAGATGACGC TGCCCGAAAT CGTTCAGCAC GTCATTCACG CCAGCGGGCT GATCACGCAT TACCAGGGTG AAAAGGAAGG CCAGGACCGC ATCGAGAACT TGCAGGAACT GGTGACAGCC GCCCAAGCTT TCGTTGCTGA AGAAGGCTAC GGCGTGGATG CGATTGCGAC CGCGCTGCCC GTGCGCCACG ATGCCATGCT GCGCATCGAA GGCGGCGAGA TCGATACCGC TTCTGAACTC GTCACCGACG AAACGCCTGC AGAGATGACG CCGCTCGTCG CGTTTCTGAC GCATGCCTCG CTGGAGGCTG GCGACAACCA GGCCCAGGCC GGCCAGGATG CCGTGCAAAT GATGACCGTG CATGCGGCCA AGGGGCTGGA ATTCCACGTC GTCTTCATCA CCGGGCTGGA AGAGGGCTTG TTCCCGCACG AAAACAGCCA GATGGAGAAG GACGGCCTGG AGGAAGAGCG CCGCCTGATG TACGTGGCGA TCACGCGTGC GCGTGAGCGG TTGTATCTAT CGTTCGCGCA AAGCCGCGTG CTGCACGGGC AGGTCCGCTA CCACATTCGC TCACGCTTCT TTGACGAACT GCCCGAAGAC ACATTGAAGT GGCTGACGCC GCAGCACTCG GGCTACCAGG CGACGCGTCG TGTGCAAGGC GATACCGCAT GGGGCAAGGA TTGGTTCAAG CGCCCAGAGC GTGGCGATGA CGACGCCTAC ACCGGCCGCC CGACCGGCGG CATGGACACC GGCAAGAACT ACGCCGACGC CAAGCGCGCA GAGGCCACCG GCTTCCGCGT CGGCCAGTCG GTGTTCCATA ACAAGTTCGG GGAAGGCGTC ATCACGACGC TGGAAGGCGA GGGCGCCGAG GCGCGCGCCC AGATCAAGTT CAACCGCCAC GGGGTGAAGA CGCTGGCGCT GGGCATCGCC AAGCTGGACC CGATCAACTG A
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Protein sequence | MSDLLANLNP EQRAAITLPD ESALILAGAG SGKTRVLTTR IAWLIQSARV SPSGVLAVTF TNKAAKEMTA RLQAMLPINT RAMWIGTFHG LCNRLLRAHY RDAGLPQTFQ ILDTQDQLSA VKRLLKSLNI DDEKFPPKNV QYFINGAKEQ GLRAGDLEIA NEYDRRMADL YAAYDAQCQR EGVVDFAELL LRCYELLRYN DAIRAHYQRR FKHILVDEFQ DTNKLQYAWL KILAGLGEPG VTPNAIFAVG DDDQSIYAFR GANVGNMVDF EREFRVEHRI KLEQNYRSHG HILDTANHLI SHNTRRLGKN LRTDAGHGEP VRVYQAATDG QEAGWIVDEI RDRIATGMSR SEIAILYRSN AQSRVIEHAL FSAGIPYKVY GGLRFFERAE IKHALAYLQL LENPDNDAAF GRVVNFPARG VGARSLEQLQ DAARLYGISL AAAVPYLTGA AGTKLSAFVR LIEQMRADTR QMTLPEIVQH VIHASGLITH YQGEKEGQDR IENLQELVTA AQAFVAEEGY GVDAIATALP VRHDAMLRIE GGEIDTASEL VTDETPAEMT PLVAFLTHAS LEAGDNQAQA GQDAVQMMTV HAAKGLEFHV VFITGLEEGL FPHENSQMEK DGLEEERRLM YVAITRARER LYLSFAQSRV LHGQVRYHIR SRFFDELPED TLKWLTPQHS GYQATRRVQG DTAWGKDWFK RPERGDDDAY TGRPTGGMDT GKNYADAKRA EATGFRVGQS VFHNKFGEGV ITTLEGEGAE ARAQIKFNRH GVKTLALGIA KLDPIN
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