Gene Rpic_2436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2436 
Symbol 
ID6287714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2544082 
End bp2545035 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content61% 
IMG OID642626014 
Producthypothetical protein 
Protein accessionYP_001900002 
Protein GI187929515 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.14401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCTA AAGTGACTGG AACGCCAAAA GGCGTTTCCG ATAATGGCGC TTCCGCTGAA 
GGCGGCGTGG CAAAGCAGGC TGCCGGTGCT TCCGCGTTGG AGGTTTCGGC GACGGAACTG
ACCGGGGTGA GCCCCTCGCG CCAAGCCACC ACGGCCGACA TGGATGTCAA CGTGACGGTG
GGCGTCGAAC ACGAGCCCAA AGCGGACCTG GCACATGGCC GTACCGATCG CAAGATGATC
CCCAGCCTGC GGGCACTCGC CGACGAAGAA CGCGCCACCG CAAAGAAAGC GCGCGCCTCC
TGGCAGATGT TCACGATTAT GGCAGAGTTC ATCGAGGCGA CCGAGTACCT CTCGGAGATC
CGTCCGGCCG TCTCGATCTA CGGCAGCGCG CGTCTGCGCG AGGATTCGCC GTACTACGAA
CGCACCATCG AAATCGCTCG GCTGTTCTCG GATGCGGGCT TCGCCGTCAT CTCCGGTGGG
GGCCCCGGCA TCATGGAAGC GGCCAACAAA GGCGCGCACG CGGGTAAGTC GGCCAGCGTC
GGTCTGAACA TCGAACTGCC GCACGAACAG CAAGGCAATC GATACCAGGA CATTTCGATG
CGCTTCCGCC ATTTCTTCAC CCGCAAGGTC ACGTTCGTGA AGAATTCGGA CGCGTTCATC
GTCATGCCCG GTGGTTTCGG CACGCTGGAT GAACTGGCTG AAGTGCTCAC GCTCGTCCAG
ACGGGCAAAT CGCGCAGCGT GCCGGTGGTC ATGTTCGGCA GCCACTTCTG GAAGGGCCTG
CTGGACTGGT TCCGCTTTAC GCTGCTGCCG ATGGGTCTGA TCGCCGAGCA CGACCTCGAC
ATCATGCGCA TCGTCGACGA ACCCAAGGAT GCGCTGGATG CCGTCTACGA GTTCTACGAA
AAGCGCGAAG GCACCTCGCC GATTCCGCCC AAGGAAGAGA TGTTCTATCT GTAA
 
Protein sequence
MDSKVTGTPK GVSDNGASAE GGVAKQAAGA SALEVSATEL TGVSPSRQAT TADMDVNVTV 
GVEHEPKADL AHGRTDRKMI PSLRALADEE RATAKKARAS WQMFTIMAEF IEATEYLSEI
RPAVSIYGSA RLREDSPYYE RTIEIARLFS DAGFAVISGG GPGIMEAANK GAHAGKSASV
GLNIELPHEQ QGNRYQDISM RFRHFFTRKV TFVKNSDAFI VMPGGFGTLD ELAEVLTLVQ
TGKSRSVPVV MFGSHFWKGL LDWFRFTLLP MGLIAEHDLD IMRIVDEPKD ALDAVYEFYE
KREGTSPIPP KEEMFYL