Gene Rpic_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2433 
Symbol 
ID6288571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2538735 
End bp2539613 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content62% 
IMG OID642626011 
ProductCarboxymethylenebutenolidase 
Protein accessionYP_001899999 
Protein GI187929512 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTTG ATGCAGAAGT GGAGAGTCTG GTACCCGGCC GCAGCTTTGA TCGTCGCGGT 
TTCATGAAGA CGGCGCTGGG CTCAGCCTTT GCGGCGGCGG TGCTGCCAGT GTCGGCGCAG
ACCGTCCATA CCGATTTCAA TGGGCTGACG GCCGGAGAGG TGACCGTGCC GGTGGGCGAT
TTCAAGATGC CGGCCTATCG GGCCCAGCCA GAAGGCAAGA CGAAGCTGCC AGTGGTGATC
GTCATCAGCG AGATCTTTGG CGTACACGAA TACATTGCCG ATATCTGCCG GCGCTTTGCC
AAGCTCGGTT ATCTGGCGAT CGCGCCTGAA CTGTTTGTGC GCCAGGGCGA TCCGCGTGCT
TATGGGACGG TGCAGGAAAC CGTTGCCAAC GTGGTTTCAA AGGTGCCGGA TTCCCAGGTG
GCGGGCGATA TCGACGCCAC GATCGCATGG GCCACCGAGA ACGGCGGCGA CGCGGCGCGT
ATTGGCATGA CCGGCTTCTG CTGGGGCGGG CGCCAAGTCT GGCTGGCTGC GGAGCGCAAC
CCCGGCATCA AGGCTGCAGT AGCGTGGTAC GGGCCGCTGA AGGGCAATCC GAATCCGCTG
CAACCGGTTT CGCCCGTCGA CAAGGTGGAC GAACTGAAAG CGCCCGTGCT GGGTCTCTAC
GGCGCGAAGG ACACCGTGAT CACGGAAGAC GTGCGCGACA CGATGAAGGT CGCGCTGGAA
AAATCCAGGA ACCCCAAGGC GCATGCATCG CGCATCATCG TGTACCCGAA TTCCGGCCAC
GCATTTCACG CTGACTACCG CCCGAGCTAT GTGAAGGCGG ATGCGGAAGA TGGCTGGAAG
AAGTGCCTCG CCTGGTTCAA GGATCACGGC GTGGTGTAG
 
Protein sequence
MQLDAEVESL VPGRSFDRRG FMKTALGSAF AAAVLPVSAQ TVHTDFNGLT AGEVTVPVGD 
FKMPAYRAQP EGKTKLPVVI VISEIFGVHE YIADICRRFA KLGYLAIAPE LFVRQGDPRA
YGTVQETVAN VVSKVPDSQV AGDIDATIAW ATENGGDAAR IGMTGFCWGG RQVWLAAERN
PGIKAAVAWY GPLKGNPNPL QPVSPVDKVD ELKAPVLGLY GAKDTVITED VRDTMKVALE
KSRNPKAHAS RIIVYPNSGH AFHADYRPSY VKADAEDGWK KCLAWFKDHG VV