Gene Rpic_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2429 
Symbol 
ID6287220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2534615 
End bp2535712 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content61% 
IMG OID642626007 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_001899995 
Protein GI187929508 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.979535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATC TCAGCGCCGC ACTGAATCTG GTGCCGTCTG AAACCCAGCT GCCCGTCTCT 
GCTTACTTCG ACGAGGCGCT GTATCAAACT GAAATCGAAC GTCTGTTCAA ACATGGCCCC
GGCTACGTCG GCCATGAGTT GATGGTCCCG GAAGTCGGCG ACTATCACAC GCTTGCCGCC
GAGGCCGAAG GCCGCGTGCT GGTGCGCAAC CCGAACGGCG TCGAGCTGCT CTCCAACGTG
TGCCGGCATC GGCAGGCAAT CATGCTCAAT GGGCGCGGCA ATGCCCAGAA CATCGTCTGC
CCGCTGCATC GCTGGACATA CGACCTGCAG GGCGACTTGC TGGGCGCACC GCACTTCGAG
AAGCAACCAT GCGTGCATCT TTCGCGCTCG CCGCTGCAGA ACTGGAACGG TCTGCTGTTC
GAAGGCAAGC GTGACGTGCG TGAAGACCTC GCTCGCCTAG GCGTGGCGCG CGATCTCGAT
TTTTCCGGCT ACATGCTCGA CCACGTCGAG GTGCACGACT GCAACTACAA CTGGAAGACC
TTCATCGAGG TGTACCTCGA GGACTACCAC GTCGTGCCCT TCCATCCTGG CCTCGGCCAG
TTCGTCTCGT GTGACGACCT GGAATGGGAG TTTGGCGAGT GGCACAGCGT GCAGACGGTC
GGCATTCATG CCAATTTGCG CAAACCCGGC ACACCGGCCT ACCAGAAGTG GCACGACGCC
GTGCTTCGCT TCAACAACGG CGAGATGCCG AAGTACGGCG CGGTGTGGCT CACGTACTAC
CCGAACGTGA TGGTCGAGTG GTATCCGAAC GTGCTGGTGG TCTCGACGCT GCATCCGCTC
GGCCCGACCA AGACGCGCAA CGTGGTCGAG TTCTACTACC CGGAAGAGAT CGTGTTGTTC
GAGCGTGAAT TCGTTGAAGC CGAGCGCGCC GCCTATATGG AAACGTGCAT CGAGGACGAC
GAGATTGCCG AGCGCATGGA CGCGGGGCGC CTAGCGCTGC TCAAACGCGG CACGAGCGAA
GTCGGCCCGT ACCAGTCGCC CATGGAGGAC GGCATGCAGC ACTTCCACGA ATGGTATCGG
CGCACGATGC ACTACTAA
 
Protein sequence
MSNLSAALNL VPSETQLPVS AYFDEALYQT EIERLFKHGP GYVGHELMVP EVGDYHTLAA 
EAEGRVLVRN PNGVELLSNV CRHRQAIMLN GRGNAQNIVC PLHRWTYDLQ GDLLGAPHFE
KQPCVHLSRS PLQNWNGLLF EGKRDVREDL ARLGVARDLD FSGYMLDHVE VHDCNYNWKT
FIEVYLEDYH VVPFHPGLGQ FVSCDDLEWE FGEWHSVQTV GIHANLRKPG TPAYQKWHDA
VLRFNNGEMP KYGAVWLTYY PNVMVEWYPN VLVVSTLHPL GPTKTRNVVE FYYPEEIVLF
EREFVEAERA AYMETCIEDD EIAERMDAGR LALLKRGTSE VGPYQSPMED GMQHFHEWYR
RTMHY