| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2427 |
|---|
| Symbol | |
|---|
| ID | 6287218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2533008 |
|---|
| End bp | 2533919 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642626005 |
|---|
| Product | Polyprenyl synthetase |
|---|
| Protein accession | YP_001899993 |
|---|
| Protein GI | 187929506 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATT TCGCCCAATG GATGGCGTCT GTGGTCGCGC GGACGGAAGT TGCGCTCGAG
CGCGCGCTGC CGGCCGAAAC CGTCTCGCCA CAACGTCTGC ATGCCGCCAT GCGGTACGCC
ACGCTGGGTG CGGGAAAGCG TGTGCGCCCA TTGCTGGCAC ATGCTGCCGG TGCGCTGGGC
GACGCATCGC CGGAGGCGCT AGACGGCGTG AGTTGCGCGG TGGAGATGAT CCACGCCTAT
TCGCTCGTCC ACGACGACAT GCCTTGCATG GACGACGACG ATCTGCGCCG TGGCCGTCCC
ACCGTACATC GCGCCTATGA TGAAGCGACG GCCCTTCTGG TAGGTGACGC CTTGCAAACG
CAGGCGTTCA TCGTGCTGGC AGAGCAGGGT GCGGTGCGCC CGGCCACGCG TGCAGTGCTG
ATGGGCGAAC TGGCGCGCGC CTCGGGTTCG CAGGGCATGG CAGGCGGCCA AGCGATCGAT
CTGCAGAGCG TTGGCATTGC GCTGTCGCAA GACGAACTGG AAGCGATGCA CCGCATGAAG
ACCGGTGCGC TCCTGCGGGC GAGCCTGCGG ATGGGCGCGC TCTGTGCTGA GGTGAATGCC
GCTGCCTTGG AGCATGTCGA TGCTTATGCG GGTGCTGTCG GCCTCGCGTT CCAGGTGGTC
GACGACATTC TCGATGTGAC GGCCGATACC GCCACGCTGG GCAAAACTGC GGGCAAGGAC
GAGGCCAACG ACAAACCGAC TTACGTGTCC ATCCTTGGGT TGGACAAGGC CCGGGCACTG
GCCGATGAGC TGCACGCCGC GGCGGGAGCG GCGGTCGCGG AACTGGCCCG CGAGATCGGC
TGTGAAGCGG GCCGAGCCCG TACCGTTCGA TTGGCCGAGA TGGCCGACCT GATCGTGCGG
CGTGGCCACT GA
|
|---|
| Protein sequence | MSDFAQWMAS VVARTEVALE RALPAETVSP QRLHAAMRYA TLGAGKRVRP LLAHAAGALG
DASPEALDGV SCAVEMIHAY SLVHDDMPCM DDDDLRRGRP TVHRAYDEAT ALLVGDALQT
QAFIVLAEQG AVRPATRAVL MGELARASGS QGMAGGQAID LQSVGIALSQ DELEAMHRMK
TGALLRASLR MGALCAEVNA AALEHVDAYA GAVGLAFQVV DDILDVTADT ATLGKTAGKD
EANDKPTYVS ILGLDKARAL ADELHAAAGA AVAELAREIG CEAGRARTVR LAEMADLIVR
RGH
|
|---|
| |