Gene Rpic_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2425 
Symbol 
ID6288500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2529985 
End bp2530791 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content61% 
IMG OID642626003 
Productputative GTP cyclohydrolase 
Protein accessionYP_001899991 
Protein GI187929504 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00294] conserved hypothetical protein TIGR00294 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA TGAACCCGGC TTTCGCGATG CCGGACGTGC AGTCCAGCCA CGATACCCGC 
CAGATTCCCA TTCAGCGTGT TGGCGTGCGC GGCGTGCGTT ACCCGATGTC GCTGCAAACC
CCTTCAGGCG TGCTGAACAC CGTCGGCACG TACAATCTTG ACGTGCATCT GCCGGCCGAC
CAGAAGGGCA CGCACATGTC GCGCTTCGTC GCGCTGCTTG AAGAAGAGCG CGAGCCGCTG
AATCTGGCGC AGTTCCAGTT GCTGCTGGAA AAGATGCTGG AGAAGCTCGA AGCCGACGCC
GGCCGCATCG AAGTCCACTT CCCGTATTTC GTCAGCAAGA CGGCCCCGGT GTCGGGCGTG
CAGTCGCTGA TGGACTATGA AGTGACGATG ATTGGCGAAG TGCGCGACGG CCACACCAAG
GTCCGCGTCA AGGCGCTGGT GCCGGTGACG AGCTTGTGCC CATGCTCGAA GAAGATCTCG
CAGTACGGTG CGCACAACCA GCGCTCGCAC ATCACGATCG ACGCCGAGCT GGCGGCCGAT
ACGCCGGTCG AGGCGCTCAT TCGCATGGCC GAAGAAGAAG CGTCGTGCGA ACTGTGGGGC
CTGCTCAAGC GTCCGGACGA GAAGTTCGTG ACCGAGCGTG CGTACGAAAA CCCGAAGTTC
GTGGAAGACC TGGTGCGCGA TATCGCCATG CGCCTGAACC AGGACGATCG CATCGTCGCC
TACACGCTGG AAGCGGAAAA CTTCGAGTCG ATTCACAACC ACAGCGCCTA TGCGCTGATC
GAGCGCGACA AGCGCTCCGA CAAGTAA
 
Protein sequence
MNDMNPAFAM PDVQSSHDTR QIPIQRVGVR GVRYPMSLQT PSGVLNTVGT YNLDVHLPAD 
QKGTHMSRFV ALLEEEREPL NLAQFQLLLE KMLEKLEADA GRIEVHFPYF VSKTAPVSGV
QSLMDYEVTM IGEVRDGHTK VRVKALVPVT SLCPCSKKIS QYGAHNQRSH ITIDAELAAD
TPVEALIRMA EEEASCELWG LLKRPDEKFV TERAYENPKF VEDLVRDIAM RLNQDDRIVA
YTLEAENFES IHNHSAYALI ERDKRSDK