Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2413 |
Symbol | |
ID | 6287917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2511100 |
End bp | 2514411 |
Gene Length | 3312 bp |
Protein Length | 1103 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642625990 |
Product | Carbamoyl-phosphate synthase L chain ATP-binding |
Protein accession | YP_001899979 |
Protein GI | 187929492 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG1038] Pyruvate carboxylase [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.370889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTTC GCAAACTGCT GATCGCCAAT CGCGGCGAGA TCGCCATTCG CATTGCCCGC GCAGCCGCCA CGATGGGCTT GCCCTCCGTC GCCATCTATT CCGAGGACGA TCGCGACGCG CTGCATCCAC TACGCGCAGA TGAAGCCGTG CCCTTGTCCG GGACCGGCCC ACGCGCATAC CTTGACGGCG CGGCCATCCT CGCCGCTGCA CGCGCCGTCG GGGCCGAAGC CGTCCATCCC GGCTATGGGT TCCTAAGCGA GAACGCCGCG TTCGCGCGCC AGTGCGCCCA GGCCGGCGTG CAGTTCATCG GGCCGTCACC GCGTGTGCTC GACCTCTTCG GCGACAAGGC ACGCGCTCGG GCCCTTGCAC ACGAGGCCGG CATTCCCGTC GTCAGCGGCA CGCAAGGTGC GACCACGCTG GAAGAGGCGC GCGCCTTCTT CGCCGCGCTG CCGCCCTCGC ACGGCATGAT GATCAAGGCC GTATCCGGCG GCGGCGGACG CGGCATGCGC GCCGTGCACG ATGCGCAGGC GATTGCCGAC GCGTACGCGC GCTGCGTATC TGAAGCGACC GCCGCGGGTG GTGGCAGCGA CGTCTATGTG GAAGCGCTGG TGCCCGCCCC GCGCCATATC GAAATCCAGA TCGTCGCAGA CGCGCACGGC CACGTTACGC ACCTCGGCGA GCGTGAATGC AGCCTGCAGC GCCGTCACCA GAAACTGATC GAGATCGCGC CCAGCCCCGC GTTGGACGAT GCACTGCGCG CACGCATTGC CGAGGCTGCC GTCACGCTCG CCAAGGCGGC AGGCTACAGC GGCATCGGCA CCTTCGAATT CCTCGTGGAA GGCGCGGGCA CGCCGCACGC CACCTTCTAC TTCATGGAGG CCAACCCACG CGTGCAAGTC GAACACACGG TCACGGAAAT GGTGACGGGT ATCGACCTGG TCGTGACCCA GCTGGCGCTG GCGCAGGGTG CGTCGCTCGC AGATGTCGGG CTTGCTCAGC CGATCGCGCC GCGCGGCCAC GCCGTGCAGG TGCGCATCAA TGCGGAGACC CTCGATGCAA GCGGTCAGCC GCACCCGTCC ACCGGCATGC TCACCGCCTT CGAGCCGCCC AACGGCCCCG GCGTGCGCGT CGACACCTGC GGTTATGCGG GCTACCGTCC GAACCCGCGC TTCGACTCGC TGCTGGCCAA ATTGATCGTC CACGCGCCGC ACGGCACGTA TGCGCAGACG CTGACACAGA CGTACCGCGC GCTGTGCGAA TTCCGCATCG AAGGGGTAGT CACGAACAAG CGGCTGCTGC AAGACCTGCT GCGCGATGCC GACGTGCAGA CCAACGCCGT GCACACGCAG TTTCTCGATG CAAAGCTCGC CGACCTGGCC GCAGGCAACG GTGAAGCGCA TCCCGCACTG CACGCCACGT CGGTCACCAC CCCGGACCTG ACGCCCGCTA CGTCATTCAT CGACGAGCTT CCTGACGACG CAGAAGTGCT CACCGCGCCA ATGGATGGCG CGCTGATCCA GATCCATGCG CAAGCCGGTG CCACGGTCGC GCGCGGCGAG GTGCTGGCCG TCATTGAAGC GATGAAGATG GAGCACGTCG TCACCGCGCC GGCGGCCGGT CGTGTCCTGC AAGTCTGCGC ACAGCCGGGC GCAACGGTGC GCGAGGGCCA GCCGCTGGCC GCGCTGCAGC CCGGCGACGC GCAACACGAC GCCGCCGCAA CCGACGCAGA GATCGATCTC GACCACATTC GCCCGGACCT GCAAGCCGTC ATCGACCGCC ATGCATTCGG TCTCGACGCG AACCGTCCGG ATGCCGTTGC CCGCCGCCGC AAGACCGGCC AGCGCACCGC GCGCGAGAAC ATCGCACACC TGTGCGACCC AGACTCGTTC ATCGAGTACG GTGCACTGGC CATCGCAGCG CAACGCCAGC GGCGCGCACT CGATGACTTG ATTCGCTCGA CGCCGGCCGA CGGCATCATC ACCGGCATTG GCACCGTCAA CGGCACGCAC TTCCCCGATC ACGACGCGCG CTGCATGGTG CTCGCGTACG ACTACACCGT GCTGGCAGGC ACCCAGGGCA CCTTCAACCA CAAGAAGACC GACCGTGCAC TGGAGCTGGC GCAGCAATGG AAGCTGCCCG TTGTGCTGTT TGCCGAAGGC GGCGGCGGCC GACCGGGCGA CACTGAAAAG CGCGGCGTCA GTGGTCTGGA CTGCCCGACC TTCATCCACT TCGCGCGTCT TTCAGGGCTG GTGCCGACCG TCGGCATCGT GTCGGGCCGC TGCTTCGCAG GCAACGCCGC ACTGCTGGGC TGTGCCGACG TGATCATCGC CACGCGCGAC GCGACCATCG GCATGGGCGG CCCCGCCATG ATCGAAGGCG GCGGTCTTGG CGTCTACGCG CCTGAGGAGG TCGGGCCCGT CAACGTGCAG GCGCCGAATG GCGTGATCGA CGTGCTCGTC GAAAACGAGA CCGAAGCCGT GGACGCCGCG CGCCGCTACC TGAGCTATTT CCAGGGGCCG CTCGCCGACT GGGAAGCCGG CGACGTGCGC CACCTGCGCC ACGTGATTCC CGAAAACCGC ATGCGCAGCT ATGACATGCG CGCCGTAATC GATGCATTGG CCGATACGGA TTCGGTTCTG GAACTGCGTC AAGCCTTTGG TGTGGGCATC ATCACCGCGC TGATCCGCAT CGAGGGCCGC GCCTTCGGCT GCATTGCCAA CAACCCGCGC CATCTGGGCG GCGCCATCGA TTCTGCAGCG GCAGACAAGG CATCGCGCTT CATGCAGCTG TGCAACGCAT TCGACCTGCC CATCGTCTCG CTGTGCGACA CACCGGGTTT CATGGTCGGG CCGGAGGCGG AGAAGACCGC CACGGTCCGC CACGTCAGCC GCATGTTCGT GACAGCCGGC AACTTGCGCG TGCCTTTCTT CACCATCGTG CTGCGCAAAG GCTACGGCCT TGGGGCGATG GCCATGGCAG CAGGCGGTTT TCACGCGCCG CTGTTCACCG CGTCGTGGCC GAGCGGTGAG TTTGGCGGCA TGGGCATCGA AGGCGCCATC CGCCTGGGTT ACCGCAAGGA ACTGGAAGCG GTGGAAGACC CGGCAGAACG CGAGGCCCTG TTCCGCAAGA TGGTCGACGC CGCCTACGAG GAAGGCCGCG CGCTCAACAT CGCCAGCTAT CTGGAGATCG ACGCGGTGAT CGACCCGGCC GATACGCGCC GCTGGCTGCT GCGCGGGTTG CAATCGGCGC CGCCCGCCCC GCCAAGGCAC ACACGCGACC CGGCCACGCG CCGCTTCATC GACACTTGGT AG
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Protein sequence | MTFRKLLIAN RGEIAIRIAR AAATMGLPSV AIYSEDDRDA LHPLRADEAV PLSGTGPRAY LDGAAILAAA RAVGAEAVHP GYGFLSENAA FARQCAQAGV QFIGPSPRVL DLFGDKARAR ALAHEAGIPV VSGTQGATTL EEARAFFAAL PPSHGMMIKA VSGGGGRGMR AVHDAQAIAD AYARCVSEAT AAGGGSDVYV EALVPAPRHI EIQIVADAHG HVTHLGEREC SLQRRHQKLI EIAPSPALDD ALRARIAEAA VTLAKAAGYS GIGTFEFLVE GAGTPHATFY FMEANPRVQV EHTVTEMVTG IDLVVTQLAL AQGASLADVG LAQPIAPRGH AVQVRINAET LDASGQPHPS TGMLTAFEPP NGPGVRVDTC GYAGYRPNPR FDSLLAKLIV HAPHGTYAQT LTQTYRALCE FRIEGVVTNK RLLQDLLRDA DVQTNAVHTQ FLDAKLADLA AGNGEAHPAL HATSVTTPDL TPATSFIDEL PDDAEVLTAP MDGALIQIHA QAGATVARGE VLAVIEAMKM EHVVTAPAAG RVLQVCAQPG ATVREGQPLA ALQPGDAQHD AAATDAEIDL DHIRPDLQAV IDRHAFGLDA NRPDAVARRR KTGQRTAREN IAHLCDPDSF IEYGALAIAA QRQRRALDDL IRSTPADGII TGIGTVNGTH FPDHDARCMV LAYDYTVLAG TQGTFNHKKT DRALELAQQW KLPVVLFAEG GGGRPGDTEK RGVSGLDCPT FIHFARLSGL VPTVGIVSGR CFAGNAALLG CADVIIATRD ATIGMGGPAM IEGGGLGVYA PEEVGPVNVQ APNGVIDVLV ENETEAVDAA RRYLSYFQGP LADWEAGDVR HLRHVIPENR MRSYDMRAVI DALADTDSVL ELRQAFGVGI ITALIRIEGR AFGCIANNPR HLGGAIDSAA ADKASRFMQL CNAFDLPIVS LCDTPGFMVG PEAEKTATVR HVSRMFVTAG NLRVPFFTIV LRKGYGLGAM AMAAGGFHAP LFTASWPSGE FGGMGIEGAI RLGYRKELEA VEDPAEREAL FRKMVDAAYE EGRALNIASY LEIDAVIDPA DTRRWLLRGL QSAPPAPPRH TRDPATRRFI DTW
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