| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2406 |
|---|
| Symbol | |
|---|
| ID | 6287886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2503181 |
|---|
| End bp | 2503879 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642625983 |
|---|
| Product | Pirin domain protein |
|---|
| Protein accession | YP_001899972 |
|---|
| Protein GI | 187929485 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.481818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAA TCCGCCCCTC TCAAGATCGC GGTTACGCAG ACCATGGCTG GCTCAAGTCG
TATCACAGCT TCTCGTTTGC CGATTACATG GACCCGCAGC ACGTTCAATT CGGGCCGCTG
CGTGTCATCA ATGAGGACCG CGTCGCCGCC GGCATGGGCT TTGGCACCCA TGGCCACCGC
GACATGGAAA TCATCAGCTA CGTGCTCGAC GGCGAGCTGG CGCACAAGGA CAGCATGGGC
AACGGCAGCG TGCTGCGCCG GGGCGACGTG CAACGCATGA CGGCTGGGAC AGGTGTGCGT
CACTCCGAGT TCAACCACGC GCAGGACCAG ACCACGCATT TTCTGCAGAT CTGGGTGCTG
CCGGCGCAGT TGAACCTGAC GCCGGGTTAC GAAGAACGCC ATTTCGACGA GGCGGCCAAG
CGCGGCAAGC TGGCCCTGAT CGCCAGCGCC GACGGCCGTG ACGGATCGGT GAAAGTGCAC
CAGGACATGG CCCTCTACGC CGGCAAGTTC GATGGAGCAG AAACTGCGTC CCTGCCGATC
GCCGCAGGCC GCCGCGCTTA TGTGCACGTC GTGCGCGGTA AGGTGAGCGT CAACGGTCGC
ACGCTGGTGG GCGGCGACGC CGCCAAGCTG ACGCAAGAAG AGACGGTGAT GCTGTCTGGC
GGCGAAGACA GCGAAGTGCT GGTGTTCGAT CTGCCGTAA
|
|---|
| Protein sequence | MIEIRPSQDR GYADHGWLKS YHSFSFADYM DPQHVQFGPL RVINEDRVAA GMGFGTHGHR
DMEIISYVLD GELAHKDSMG NGSVLRRGDV QRMTAGTGVR HSEFNHAQDQ TTHFLQIWVL
PAQLNLTPGY EERHFDEAAK RGKLALIASA DGRDGSVKVH QDMALYAGKF DGAETASLPI
AAGRRAYVHV VRGKVSVNGR TLVGGDAAKL TQEETVMLSG GEDSEVLVFD LP
|
|---|
| |