| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2403 |
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| Symbol | dnaE |
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| ID | 6289518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2497826 |
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| End bp | 2501344 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625980 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001899969 |
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| Protein GI | 187929482 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCGC CGCGCTTCGT CCACCTCCGT CTCCACTCCG AATATTCCGT CGTCGATGGC
AATGTCCGTC TCGACGATGC CGTCAAGGCT GCCGCCAAAG ATGGCATGGG CGCCTTGGCG
CTGACCGATC TCGCCAATGC CTTCGGGCTG GTGCGCTTCT ACAAGGAGGC GCGCGGCAAG
GGCGTGAAGC CCATCGTCGG AGCCGACGTG TGGATCACCA ATCACGACGA GCGCGACAAG
CCGACGCGCC TGCTGTTGCT GGTGCGTGAC AAGCAGGGTT ACCTGAACCT GTGCCAGTTG
CTGGCCCGCG CTTGGCTCTC CAACCAACAT CGCGGCCGCG CGGAAATCGC GCCCGAGTGG
TTCGACGAGC CGGGCGTTGA GAACGCGCCG CTGGCCACCG GTCTGCTGGC GCTCTCGGGC
GCCATGGCGG GCGATATCGG CATGACGCTG GCCAATGGAA ACGATGCGCT GGCGCGCAAG
CTCGCGACGA ACTGGTCGCG CGTGTTTCCG GGCGCTTTCT ACATCGAACT GCAGCGCGCC
GGGCACGCCG GTACCGAGGC CTATATTCAG CAGGCCGTGA AGCTGGCCTC GGCCATGCAG
TTGCCGGTGG TGGCCACGCA TCCGGTGCAG TTCATGACGC CGGACGATTT CACGGCCCAC
GAAGCGCGCA CCTGCATTGC AGAGGGCGAA CTGCTTGCCA ATCCGCGCCG CGCCCGTCGT
TTCACGACCG AACAGTATTT CAAGACGCAG GACGAGATGT GCGCGCTGTT TGCCGACATC
CCGTCCGCGC TGGCCAACTC GGTGCAGATC GCGCAGCGCT GCAACCTCAA GCTGGAACTG
GGCAAGCCCA AGCTGCCGCT GTTCCCGACG CCCGATGGCA TGTCGCTGGA TGACTACCTC
GTCCAGCTCG CCAAGGAAGG GCTGGAAAAG CGCATGGAAG TGCTGTTTCC CGACGAGGCG
GTGCGCGAAT CCAAGCGCGC TGAGTACTAC GCCCGCCTGG AGTTCGAGAC CGGCACCATC
ATCAAGATGG GCTTCCCCGG CTATTTCCTC ATCGTTGCGG ACTTCATCAA CTGGGCGAAG
AACAATGGCG TGCCAGTGGG GCCGGGCCGG GGTTCGGGCG CCGGCTCTCT GGTGGCGTAC
GCGCTGGGTA TTACCGATCT GGACCCGCTC AAATACAACC TGCTGTTCGA GCGTTTCCTG
AATCCGGAAC GTGTGTCGAT GCCCGACTTC GACATCGATT TCTGCCAGCA CGGCCGCGAC
CGCGTCATCC AGTACGTGAA GGAAAAGTAC GGCAAGGACG CCGTCTCGCA GATCGCCACC
TTCGGCACCA TGGCCGCCAA GGCCGCGGTG CGCGACGTGG GCCGCGTGCT CGATCTCGGC
TACAACTTCG TTGATGGCGT GGCCAAGCTG ATCCCGTTCA AGCCGGGCAA GCTCGTCACA
CTGGAAGAAG CCAAGAAGGA AGAGCCGCTG CTGGCCGAGC GCGAAGCCAA CGAAGAAGAG
GTCAAGCAGC TCCTGGAACT CGCCCAACGC GTAGAAGGCA TGACGCGTAA CGTCGGCATG
CACGCGGGCG GTGTGCTGAT CGCCCCGGGC AAGTTGACCG ACTTCTGCCC GCTCTACACG
CAAGGCGGTG AAGATGCCGG CGTCGTCAGT CAGTACGACA AAGATGATGT GGAAGCTGTC
GGCCTGGTCA AGTTCGACTT CTTGGGCCTG ACCACACTCA CGATCCTTGA CTGGGCCGAG
CGCTACATCC GCATGCTCGA TCCGTCCAAG GCGGATTGGA ACTGCAGCCA CATTCCGCTG
ACGGACAAGA AGGCGTTCGA CATCCTGAAG ACGGCCAACA CGGTCGCCGT GTTCCAGCTG
GAAAGCCGCG GCATGCAGGG CATGCTGAAG GACGCCAAGC CTGACCGCTT TGAGGACATC
ATCGCCCTCG TGGCGCTGTA TCGCCCGGGC CCGATGGACC TGATCCCCAG CTTCTGCGCA
CGTAAGCACG GCCGCGAGAA GGTGGAGTAC CCCGATCCGC GCGTCGAGCC GGTGCTCAAG
GAGACCTACG GCATCATGGT CTACCAGGAG CAGGTGATGC AGATGGCGCA GATCGTGGGC
GGTTACTCGC TCGGCGGCGC CGACTTGCTG CGCCGAGCGA TGGGTAAGAA GAAGGCCGAA
GAAATGGCCG AGCACCGCGC GCTGTTCCGT GCGGGCGCAG CCAAGGACGG GCTCTCCACC
GAAAAGGCCG ATGAAATCTT CGACCTGATG GAGAAGTTCG CGGGCTACGG CTTCAACAAG
TCGCACGCGG CCGCGTATGC GCTGCTGGCG TATTACACGG CGTGGCTCAA GGCGCATCAC
CCGGCCGAAT TCATGGCAGC CAACATGTCG CTGGCCATGG ACGACACCGA CAAGGTGAAG
ATCCTCTACG ACGATGCCCG AGGCAAGAAC GGACTGACCG TGCTGCCGCC GGATATCAAC
GCAAGCCAGT ATCGTTTTGC ACCGACCGAC GCCAAGACCA TCCGCTACGG CCTGGGCGGC
GTGAAGGGCA GCGGCCAGGG CGCGATTGAG GACATCCTGC GGGCACGCGA AGACGGCCCG
TTCAAGGACT TGTTTGACTT CTGCGAACGC GTCGACCGCC GCCAGGTCAA TCGCCGCACG
ATCGAAGCGC TGGTGCGCGC CGGCGCCTTC GACAGCCTCA ACGCCAACCG CGCGCAGCTG
CTCGCTTCGA TCGGCTTGGC CATGGAAGCC GCAGAGCAGA AGGCAGCCGC TGCCAACCAG
GTGTCGCTGT TCGATCTGAT GAGCGGCGAC GATGCCGAGC AGCATCGCCC TGAACTCGTC
GACGAACCGG CCTGGACCAC CAAGCGCAAG CTGCAGGAAG AAAAGCAGGC GCTGGGTTTT
TACCTTTCTG GTCACCTGTT CGATGAATGC CGTGACGAGG TGCGCCGCTT CGCACGCACG
ACGCTGGCCG ATCTGGCGCG CGAAGTGACC GACAAGGGCA ACGGGGGCGG CTACGGCAAC
CGCGATGCGC GCAACAAGAC CGTGGCCGGC GTGATCGTAG GCCAGCGCAC CCAGATGACG
CAGCGCGGCA AGATGCTGAT CGTGATGCTC GACGACGGCT CCGCCAGCGA AGCCACCGAG
GTGACGGTCT TCAACGAAGT TTTCGAGGCC AACCGCGCGC TGTTCAAGGA AGACGAAGTG
CTGATCGTTC AGGGCAGCGC CCGCCATGAC ATGTTCACTG GCGGCGTGCG CGTGACAGCC
GAGTCGGTCA TGGACATGAC GCAGGCGCGC GCCAAGTTCG CGCGGGCGAT CCGGCTGTCG
ATGAATGGCG ATTCAACGGC GGCCAAGCTG CGTGATCTGC TCTCGCCGCA TGTGGCGGCC
GATGGCAATG GCGTCTCGGT ACGCATCAAC TACGTTTGTG AGCAGGCACG CTGCGAAGCG
GTGCTCGGCG ATGCGTGGCG CATTGTTCCG AGCGAAGCGG CGATCGCCGC GCTGCGTCAG
GCGCTCAATG CCGAGAACGT GGCAACGGTG TACGAGTAG
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| Protein sequence | MNSPRFVHLR LHSEYSVVDG NVRLDDAVKA AAKDGMGALA LTDLANAFGL VRFYKEARGK
GVKPIVGADV WITNHDERDK PTRLLLLVRD KQGYLNLCQL LARAWLSNQH RGRAEIAPEW
FDEPGVENAP LATGLLALSG AMAGDIGMTL ANGNDALARK LATNWSRVFP GAFYIELQRA
GHAGTEAYIQ QAVKLASAMQ LPVVATHPVQ FMTPDDFTAH EARTCIAEGE LLANPRRARR
FTTEQYFKTQ DEMCALFADI PSALANSVQI AQRCNLKLEL GKPKLPLFPT PDGMSLDDYL
VQLAKEGLEK RMEVLFPDEA VRESKRAEYY ARLEFETGTI IKMGFPGYFL IVADFINWAK
NNGVPVGPGR GSGAGSLVAY ALGITDLDPL KYNLLFERFL NPERVSMPDF DIDFCQHGRD
RVIQYVKEKY GKDAVSQIAT FGTMAAKAAV RDVGRVLDLG YNFVDGVAKL IPFKPGKLVT
LEEAKKEEPL LAEREANEEE VKQLLELAQR VEGMTRNVGM HAGGVLIAPG KLTDFCPLYT
QGGEDAGVVS QYDKDDVEAV GLVKFDFLGL TTLTILDWAE RYIRMLDPSK ADWNCSHIPL
TDKKAFDILK TANTVAVFQL ESRGMQGMLK DAKPDRFEDI IALVALYRPG PMDLIPSFCA
RKHGREKVEY PDPRVEPVLK ETYGIMVYQE QVMQMAQIVG GYSLGGADLL RRAMGKKKAE
EMAEHRALFR AGAAKDGLST EKADEIFDLM EKFAGYGFNK SHAAAYALLA YYTAWLKAHH
PAEFMAANMS LAMDDTDKVK ILYDDARGKN GLTVLPPDIN ASQYRFAPTD AKTIRYGLGG
VKGSGQGAIE DILRAREDGP FKDLFDFCER VDRRQVNRRT IEALVRAGAF DSLNANRAQL
LASIGLAMEA AEQKAAAANQ VSLFDLMSGD DAEQHRPELV DEPAWTTKRK LQEEKQALGF
YLSGHLFDEC RDEVRRFART TLADLAREVT DKGNGGGYGN RDARNKTVAG VIVGQRTQMT
QRGKMLIVML DDGSASEATE VTVFNEVFEA NRALFKEDEV LIVQGSARHD MFTGGVRVTA
ESVMDMTQAR AKFARAIRLS MNGDSTAAKL RDLLSPHVAA DGNGVSVRIN YVCEQARCEA
VLGDAWRIVP SEAAIAALRQ ALNAENVATV YE
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