Gene Rpic_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2402 
Symbol 
ID6289517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2496675 
End bp2497742 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content63% 
IMG OID642625979 
Productglycosyl transferase group 1 
Protein accessionYP_001899968 
Protein GI187929481 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.923464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCG GAATCTCGTG CAACGCGCTG GGCTACAGCG GTGGCAGCGA GCGCTACGCG 
ATGGACCTGG TGCGCGGCCT GCATGAGCGC GCCATCCGTC CCGTGTTCTT CGCCAAGATG
GTGGACAAGG CGCTTCCTGA ATATCGCCAG GTCAAGGCTG TTGCATTGCC AACGCGCAAG
CTGCCCGGCA AATTGAATGA CCACGCGTTC GGCTGGCTCG TGCGCCATCT GACCAAGCGC
GAGCACATCG ATCTGATGAT CGGCTGCAAT CGCACGGGCG CTTCGGATAT CGCTATTTGT
GGCGGCACGC ACGTCGGCTA TCTCAAGAGC TTTTCAAAAA AGGCGGCCTT CTGGGATCGC
CAGCAGATCG CGCTGGAGCG CCGAGACTAT GTGCGCTCGC ACGTCGTCGT TGCGCACTCG
CGACTGATGG CGCAGGAAGT GCTCGACTAC TACGACATTC CCGCTGCCAA GGTAAAGACG
GTGTACCCCC CGGTGAGTGA GACGAAGTTC TCGCCGGTGG ATGACGCAGA GCGCCAGCGC
CTGCGCGATG AGCTTGGCTT CGCGAAGGAT CGGGTCACGT TTGTGTTCCC GTCGTCGAGC
CACAAGCGCA AGGGCTATCC GCTGCTGGAG GCGTTCTTCT CCAAGACGGA TCTGCCGGTG
CAACTGGTGG TCATCGGGCG CCCGGTGTCC TCGTCCTCGC CCAACATCCG CTACCTGGGA
TACCGCAAGG ACATCGAGAA CGTCTACCGC GCAGCGGACT ACACGATCCT CGCTTCGCAC
TACGAGCCGT TCGGGCTGAT TGGGGTGGAG TCCGTGCTGT GCGGCACGCC TGCCGTACTG
GCAGCCAATA TCGCTTGCAC CGAGGTGATC TCGGTCGAAG GAGCACCCAC CTTCGACCTG
GATGATCCAG CCACGCTGGC GCGCACGATT GAGGCAGCTG TTGCCCGTGC GCAGGCTGGG
CAGGCGCGCT TGGCGAATCC GCGTGAGCAC CTGCGCTATG ACCCGAGCAT CGCTGCGCAC
ATCGACGCGC TCCTGGCGCT TGCACCTGGC GCGGGGACGT TGCGATGA
 
Protein sequence
MNVGISCNAL GYSGGSERYA MDLVRGLHER AIRPVFFAKM VDKALPEYRQ VKAVALPTRK 
LPGKLNDHAF GWLVRHLTKR EHIDLMIGCN RTGASDIAIC GGTHVGYLKS FSKKAAFWDR
QQIALERRDY VRSHVVVAHS RLMAQEVLDY YDIPAAKVKT VYPPVSETKF SPVDDAERQR
LRDELGFAKD RVTFVFPSSS HKRKGYPLLE AFFSKTDLPV QLVVIGRPVS SSSPNIRYLG
YRKDIENVYR AADYTILASH YEPFGLIGVE SVLCGTPAVL AANIACTEVI SVEGAPTFDL
DDPATLARTI EAAVARAQAG QARLANPREH LRYDPSIAAH IDALLALAPG AGTLR