Gene Rpic_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2400 
Symbol 
ID6289515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2494612 
End bp2495385 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID642625977 
Productglycosyl transferase family 2 
Protein accessionYP_001899966 
Protein GI187929479 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0233946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAT CCAATCGAGC CACGCTCGCC GTCATCATCG TCGCCAAGAA CGAAGCCGCC 
GATATCGGCG ACTGCATCCG CTCGGTGCGC GACTGGGCGG ATGATGTCAT CGTCTTCGAC
TCGGGCAGCA CGGACGGCAC GCAGGACATC TGTCGCCAAC TCGGTGCGCG CGTGTTCGAG
ACCGACTGGC CCGGCTACGG CGAGCAGTCC AACCGCGCGT TGCGCGAAGC CCGCACTGAC
TGGGTGCTCT CACTGGATGC CGACGAGCGC ATCAGTCCCG AGTTGCGGGC CGAGATGATC
GCCGTACTGG AATCGGGCAG TCCGCACACT GTCTACTCCA TGCCGCGCAG CTCGAGTTTT
TGTGGCCGCT TCATGAAGCA TTCGGGCTGG TGGCCGGACC GCATTCGTCG CTTCTTCAAG
CGCGAGCAGG TGACGTTCTT CGATGCGCCG GTGCACTCGC ACCTTGTCTT CGAGGGTACG
GTGGGCGATT TCCGCGCCCC GATCATCCAT TATTCGATTC CCGACCTGAA GGCTGCGCTC
GACAAGGCCA ACGATTATTC GACCGCAGGT GCGGCCGCGG CTTATGCCAA GGGCAAGCGC
GCGTCGTTGG GCAGTGCCAT CGGCCACGGG CTATGGGCAT TCATCCGTAC GTACATCATC
CAGCGGGGTT TCCTCGATGG CGCCGAGGGC TTCATGCTGG CCGTGTCGAA CGCCGAGGGC
ACGTATTACC GCTACGTCAA GCTGATGATG CTGCATCGTT ATGGCAAGCT CTGA
 
Protein sequence
MPASNRATLA VIIVAKNEAA DIGDCIRSVR DWADDVIVFD SGSTDGTQDI CRQLGARVFE 
TDWPGYGEQS NRALREARTD WVLSLDADER ISPELRAEMI AVLESGSPHT VYSMPRSSSF
CGRFMKHSGW WPDRIRRFFK REQVTFFDAP VHSHLVFEGT VGDFRAPIIH YSIPDLKAAL
DKANDYSTAG AAAAYAKGKR ASLGSAIGHG LWAFIRTYII QRGFLDGAEG FMLAVSNAEG
TYYRYVKLMM LHRYGKL