Gene Rpic_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2392 
Symbol 
ID6287388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2487011 
End bp2487628 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID642625969 
Productiojap-like protein 
Protein accessionYP_001899958 
Protein GI187929471 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.177985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTC GCAAACTACA ACGCGTGATC GTCGACGCGC TCGAAGACGT CAAGGCGCAA 
GACATCAAGG TCTTCAATAC GACGCACCTG ACCGAACTGT TCGACCGCAC GGTCATTGCC
AGCGGCACCT CCAACCGCCA GACCAAGGCC CTCGCCGCCT CCGTGCGTGA CGCCGTCAAG
GAAGCCGGCG GCCACATCAT CGCCGTGGAA GGCGAAGACG TGGGCGAATG GGTGCTGGTC
GACTGCGGCG ACGCCGTGGT CCACATCATG CAGCCGCAGC TGCGCCTGTA CTACAACCTC
GAAGAGATCT GGGGTGACAA GCCGGTGCGC ATCGAACTCG GCGGCACCGG CAAGCGCGGC
CTGCCCAAGG CCAGTGAAGG TTACGACGAC GAGGAAGACG AGGCCGAAGA GGTCACGCCC
GCCAAGCGCC GGACCACCAA GCCGAAGCTG GCTGGTGAGC GCCCGACCAA GGCCGCCGCA
CCGGCCAAGA AGGCTCCTGC CAAGACCGCC CCCAGGAAGC CGGCCACCAA GCGCGCACCC
GGCACAGGCA AGCCCGCCAC GAAGACGGCC GCAAAGACGG CCACCAAGCG CGCGCCAGCC
AAGAAGCGCG CGGCGTAA
 
Protein sequence
MDIRKLQRVI VDALEDVKAQ DIKVFNTTHL TELFDRTVIA SGTSNRQTKA LAASVRDAVK 
EAGGHIIAVE GEDVGEWVLV DCGDAVVHIM QPQLRLYYNL EEIWGDKPVR IELGGTGKRG
LPKASEGYDD EEDEAEEVTP AKRRTTKPKL AGERPTKAAA PAKKAPAKTA PRKPATKRAP
GTGKPATKTA AKTATKRAPA KKRAA