Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2385 |
Symbol | |
ID | 6288542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2479078 |
End bp | 2480556 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642625962 |
Product | NCS1 nucleoside transporter family |
Protein accession | YP_001899951 |
Protein GI | 187929464 |
COG category | [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA CCACCTCTGC CGCATTCTCT GCGGACGCCG CCGGGGCACC CGACCCGACC CTCTGGAACG AAGACCTCAA CCCCACCCCG CCCGCCGCCC GCACCTGGAC GGCCACCAAC TACGCCGCGC TGTGGGTGTC GATGGTGGTG TCGGTGCCGG CCTATATGTT GGCTTCGGGC CTGATGAGTG AGGGCATGAA CTGGTGGCAG GCCGTGCTGA CGGTGTTCCT CGGCAACCTG ATCGTGCTCG TGCCGATGGT GCTGGTGGGG CACGCGGGTA CCAAGTACGG CATTCCCTTC CCTGTGCTGG TGCGGGCCTC GTTCGGCGTG CGCGGTGCGC AGTTGCCGGC CATTCTGCGG GCCATCGTGG CGTGCGGCTG GTTCGGCATC CAGACGTGGC TGGGCAGCCA GGCGATCTAC ACGATCCTCA ACGTCGTCAC GGACAACATG CTGGTCGGCA GCAATATTCC GGGGCTGGGC ATCAACCCGG GCCAGGGATT CTGCTTCCTG CTGTTCTGGG CGCTGCACAT CTGGCTGATC ACCAAGGGGC TCGAATCGAT CAAGCGCTTC CAGGCGCTGG CCACCCCGCT GCTGATTCTG GCCGCGCTGG GCCTGGTCTG GTGGGCGTAT ACCAATGCGG GCGGCTTTGG CCCGATGCTG TCGGCGCCGT CGGCGTTTGC GGCGGGCGGC AAGCGCGCCG GCGAGTTCTG GGGCTTCTTT TGGCCGTCGC TCACCGCCAT GGTCGGCTAC TGGGCCACGC TGGCGCTGAA CATTCCCGAC TTCACCCGCT TCGCGCGCAG CCAGCGCGAT CAGCTTGTCG GGCAGGCAGT CGGCCTGCCG CTGCCGATGG GGCTGCTGGC CCTGGTGGCC GTGCTGGTCA CGTCGTCCAC GGTGGTCATC TACGGTCAGG CCATCTGGGA TCCGGTCACG CTGGCCGGCA AGATGACCGG CCCGTCGGTC ATCGTGGCCC TGCTGGCGCT GATCACCGCC ACGCTGATGA CGAACATCGC CGCCAACGTG GTCTCGCCGG CGTATGACTT CTCGAACCTG GCGCCGCATC GCATCTCGTT CCGAACCGGC GGCTACATCA CGGCAGGCAT CGGCCTGGCG ATAATGCCGT GGAAGATCCT GGAAACCACC AAGGGCTACA TCTTCACGTG GCTGGTCGGC TATGGCGCGC TGCTCGGCCC CGTGGCCGGG ATCATGATGG TCGACTACTT TCTGGTGCGC CGCACCGTGC TCAAGACCGG CGAGCTATTC CGCGTAGACG GCCCGTACGG TTACGGCAAC GGCTGGAACG GCCGCGCTAT CGCCGCGCTG GTCATCGGCG TGCTGCCCAA TCTGCCGGGC TTCTTCAAGC AGGCGGGATT CGTCGCCAGC GTGCCCGGCG TATTCGAAGC GCTGTACACG TATGCGTGGT TCGTGGGCCT GGCGATTTCC GCCGTGGTGT ATGTGATCCT GATGCGCGGC CGCCGTTGA
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Protein sequence | MSQTTSAAFS ADAAGAPDPT LWNEDLNPTP PAARTWTATN YAALWVSMVV SVPAYMLASG LMSEGMNWWQ AVLTVFLGNL IVLVPMVLVG HAGTKYGIPF PVLVRASFGV RGAQLPAILR AIVACGWFGI QTWLGSQAIY TILNVVTDNM LVGSNIPGLG INPGQGFCFL LFWALHIWLI TKGLESIKRF QALATPLLIL AALGLVWWAY TNAGGFGPML SAPSAFAAGG KRAGEFWGFF WPSLTAMVGY WATLALNIPD FTRFARSQRD QLVGQAVGLP LPMGLLALVA VLVTSSTVVI YGQAIWDPVT LAGKMTGPSV IVALLALITA TLMTNIAANV VSPAYDFSNL APHRISFRTG GYITAGIGLA IMPWKILETT KGYIFTWLVG YGALLGPVAG IMMVDYFLVR RTVLKTGELF RVDGPYGYGN GWNGRAIAAL VIGVLPNLPG FFKQAGFVAS VPGVFEALYT YAWFVGLAIS AVVYVILMRG RR
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