Gene Rpic_2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2377 
Symbol 
ID6288979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2471964 
End bp2473073 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content66% 
IMG OID642625954 
Productinner-membrane translocator 
Protein accessionYP_001899943 
Protein GI187929456 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.583933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG TCATGCATGG CAGCCGCCTG GCGCTGCCGG TTTCGCTGGA GCTGCGGGCG 
ATCCCGTCGC GCACCATGGC CTATGCCTCG CCGCTCATCG CGCTGGTGTT GACGATGGTG
TTCGGCCTGC TGCTGTTCGC GCTGCTTGGC AAAGACCCCG TGGCCGGCCT GCGCGTGTTC
CTGGTCGAAC CGCTGGTCAG CAAGCGGGCG ATTGGCGAAG TGCTGCTCAA GACCGTGCCG
CTGGTGCTGT GCGCGCTGGG CTTGTCGGTG TGCTATCGCA CCAACGTGTG GAACATCGGC
GCGGAGGGGC AACTGATCTT GGGCGGCATT TTCGCCGCGG CTACGATCGT CTACTTCGAT
ACGCCGACAC CCGCCATCCC GGGCGGCTTT GCGCTGGTGC TGGCCCTCGT TGCTGGCCTC
ATCGGCGGCG CGCTGTGGGC AGCGATCACG GCGCTGCTGC GCGATCGCTT TCATGCCAAC
GAGATCCTCG TCTCGCTCAT GCTCACGTAC ATCGCGCAGT TGCTGCTGCT GTACGTGGTC
AACGGGCCGT TGAAGGACCC GAACGGCATG AACTTCCCGC AATCGATCGT GTTCGACAGC
GCGTTCGTTC TGCCGACGCT CGTGGCCGGC ACGCGCCTGC ACGTTGGCTT CCTGTTCATG
CTCGTGATGA CGGCGGCGAT GACGTTGTTT GTCTTCCGCA GCTTTGCGGG CTATCGCCTT
CAAGTCGGTG GCCTGGCCCC GCAAGCCGCG CGCTATGCGG GCTTCTCGTC GCGCGCGGCG
CTGTGGACGG CGCTGCTGGT GTCGGGCGGC CTGGCAGGCG TTGCCGGCGC CTTCGAGGTC
ACGGGGCCGA TCGGGCAACT GCTGCCGTCC ATTTCCCCCG GCTACGGCTT TGCCGCCATC
GTGGTGGCGT TCGTCGGGCG CCTGAATCCG GTGGGCACCG TGCTGGGTGC GATCGTGATG
TCGCTGTTCT ACATCGGCGG CGAGCTTGCG CAATCGCGCC TGGGCCTGCC GTCGGCCATT
ACCGGAGTGT TCCAGGGGAT GCTGCTGTTC TTCCTGCTCG CCTGCGACAC GCTCATCGAA
TACCGCCTGC GCTGGCGCGC ACATCACTGA
 
Protein sequence
MADVMHGSRL ALPVSLELRA IPSRTMAYAS PLIALVLTMV FGLLLFALLG KDPVAGLRVF 
LVEPLVSKRA IGEVLLKTVP LVLCALGLSV CYRTNVWNIG AEGQLILGGI FAAATIVYFD
TPTPAIPGGF ALVLALVAGL IGGALWAAIT ALLRDRFHAN EILVSLMLTY IAQLLLLYVV
NGPLKDPNGM NFPQSIVFDS AFVLPTLVAG TRLHVGFLFM LVMTAAMTLF VFRSFAGYRL
QVGGLAPQAA RYAGFSSRAA LWTALLVSGG LAGVAGAFEV TGPIGQLLPS ISPGYGFAAI
VVAFVGRLNP VGTVLGAIVM SLFYIGGELA QSRLGLPSAI TGVFQGMLLF FLLACDTLIE
YRLRWRAHH