Gene Rpic_2373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2373 
Symbol 
ID6286329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2466786 
End bp2467835 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content67% 
IMG OID642625950 
Producturea amidolyase related protein 
Protein accessionYP_001899939 
Protein GI187929452 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.586718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.68742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGA AACCCCAACC CATGATCGAG ATCGTGCGGG CCGGCGTGCT GGCGTCCGTG 
CAGGACCTGG GCCGCACCGG CTATCGCCGT TTTGGCGTGT GCACGTCGGG CGCGCTGGAT
CCGCTGTCGC TGTATGTGGG CAACCGCTTG GTTGGCAACC GCAGCGATGC GGCGGGCATC
GAGTTCACGC TGGGCAACGC CACGCTGCGC TTCCACGCCA ATGGCCTGAT CGCGCTGACG
GGCGCCGATT GCCGCGCCAC GCTCGACGGC GCACCGGTGC ATGCTTGGCG CGCCATCCCC
GTGCAACGCG GGCAGATGCT GACATTGCGC GTGGCGCAGG GCGGGGTGCG TGCGTATCTC
TGCGTGGCCG GCGGCATCGA TGTGCCCGAG ATGATGGGCT CGCGCAGCAC CGATCTGAAA
GCCGGCTTTG GTGGTTTCGA AGGGCGCCCG TTGAAAGACG GCGACAGGCT GCCCGTGCTG
CCTGCCGACA CAACGTACGC CCCCGACATC AGCGGCGATA CCGTTGCCGT GAAGGCCGCC
CGCTGGACGT TCGACCGCGC GCAGAAGGAC ACGCCGGTCA TGCGCGTGCT GCCCGGTCCT
GAATACGACG ATTTCGTTGC CGACGCGCAA GCCGCATTCT GGGAATCGGA CTGGACGCTC
ACCCCCAACA GCAACCGGAT GGGTTTTCGC CTGCAGGGGC CGGAACTCAA GCGCAAAAAG
CAGCGCAGCG GCGATCTGCT CTCGCACGGC GTGGTGCCGG GCGTGATCCA GGTGCCGCCG
TCTGGCCAGC CCATTGTGTT GATGGCCGAT GCGCAAACCA CGGGCGGCTA TCCGAAGATC
GGCTCCGTCA TCCTGGCCGA CCAATGGCGC CTGGCGCAGA TTCCGCTCGG CACGCGCGTG
CGCTTCGAGC GTGTCACGCT GGAAGAGGCC GAAGCCGCCC GCGCCGACGT GGCACGGTAT
CTGCAGCAAA TCGAAACCGC ACTGGATTGG CAGCGCCAAG GCATTCTGTC GAGCGCGCAT
CGCACCGCCA AGACGCGACT GAACGCCTGA
 
Protein sequence
MSSKPQPMIE IVRAGVLASV QDLGRTGYRR FGVCTSGALD PLSLYVGNRL VGNRSDAAGI 
EFTLGNATLR FHANGLIALT GADCRATLDG APVHAWRAIP VQRGQMLTLR VAQGGVRAYL
CVAGGIDVPE MMGSRSTDLK AGFGGFEGRP LKDGDRLPVL PADTTYAPDI SGDTVAVKAA
RWTFDRAQKD TPVMRVLPGP EYDDFVADAQ AAFWESDWTL TPNSNRMGFR LQGPELKRKK
QRSGDLLSHG VVPGVIQVPP SGQPIVLMAD AQTTGGYPKI GSVILADQWR LAQIPLGTRV
RFERVTLEEA EAARADVARY LQQIETALDW QRQGILSSAH RTAKTRLNA