Gene Rpic_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2285 
Symbol 
ID6288171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2405391 
End bp2405873 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content58% 
IMG OID642625860 
Productprotein of unknown function DUF847 
Protein accessionYP_001899851 
Protein GI187929364 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.249746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAGCT TTGATGATGC TTTTGACGCC CTAATTGGGA ATGAGGGCGG CTACAGCAAC 
AACCCGGCTG ACCCGGGAGG GGAAACAATG TGGGGCATCA CCGCCCGCGT AGCCCGCGCA
AGTGGCTATA CCGGCCCGAT GCGAGAACTG CCCCAAGTAA CGGCAAAAGC CATTGCCAAG
AAGCTCTATT GGGATCCGTT GCATCTCGAT GAATTAGATC CGCGTGTGGC GTTTCAGATC
TTCGATGCCA ACTACAACGG TGGTCATCCG GTGATCTGGA TGCAAGGCGC GTCCGGCGCC
AAGGTCGACG GTCTGCTCGG ACCGCAGACA ATCGCCGCAG TGCAAGCGAC CGATCCCCTA
CGTTTCATGA TGCGCTGGAA CTCGATCCGC CTGCGTTACT TCACGGCCAT CAAGACGTGG
CTCACCTTCG GGCGAGGCTG GGCAATCCGC ATCGCCAACA ACCTTTGGAA AGGAGCTGCG
TGA
 
Protein sequence
MSSFDDAFDA LIGNEGGYSN NPADPGGETM WGITARVARA SGYTGPMREL PQVTAKAIAK 
KLYWDPLHLD ELDPRVAFQI FDANYNGGHP VIWMQGASGA KVDGLLGPQT IAAVQATDPL
RFMMRWNSIR LRYFTAIKTW LTFGRGWAIR IANNLWKGAA