| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2282 |
|---|
| Symbol | |
|---|
| ID | 6288802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2401708 |
|---|
| End bp | 2402976 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642625856 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001899848 |
|---|
| Protein GI | 187929361 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.485067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.946355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGA TTTACCCCGC CGGCGCAGCC AAGACGCCTG CCGCGACTGC CGCTGAGACC
GGTGACAAGG TCACCTCCGT CTTCCTGCAG CCGGGCAAGA TCAACTTGCC CGCTTCGCCG
CCGCTGTCCT TGTACGTGCA CGTGCCGTGG TGCGTACGCA AGTGTCCGTA CTGCGATTTC
AACTCGCATG CGGAGCCGGA ACAGGGCATC CCGGAAGAGC GCTTTCTGGC TGCCGTGCGG
CAAGACCTGG AAGCCGCGCT GCCGATGGTG TGGGGCCGGC ATGTGCACAC GATCTTCATC
GGGGGCGGTA CGCCGAGCTT GTTGTCGGCG CAAGGGCTGG ACCGCTTGCT GTCGGACATC
CGCATGCTGC TGCCAGTTGA CGCCGACGCC GAGATCACGA TGGAGGCCAA CCCGGGCACG
TTCGAGGCAG AACGCTTCCG TAGCTACCGC GCCAGCGGCG TGAACCGCCT GTCGATCGGC
ATCCAGAGCT TCAACGACGC ATACCTGCAG GCGCTAGGCC GCATCCACAG CGCCGCTGAA
GCGCGCGCCG CCATCGACAT GGCCCGCGCG CATTTCGACA ACATCAACCT CGACCTGATG
TTCGCGCTGC CGGGCCAGAC ACTTGCCGAG TGCGAGGCCG ATGTTGAGGC CGCGTTGTCG
TTCGATACGA ATCACGTGTC GCTGTACCAC CTGACGCTGG AGCCGAACAC CTACTTCGCC
AAGTACCCGC CCGCGCTGCC GGATGACGAC GCGGCGTTTG CAATGCAGGA CTGGATTCAC
GCGCGGTTGG CAGCGGCAGG CTACGAGCAC TACGAGGTGT CGGCATACGC CAAGGCCGGC
AAGCGCTGCA AGCACAACCT GAACTACTGG CAATTCGGCG ATTACCTCGG CATTGGCCCG
GGCGCACACG GCAAGCTCAG TTTTCCGCAC CGGGTCATCC GCGAGATGCG GCACAAGCAT
CCGGACACGT ATCTGCGCCA GGCCGAGACT GCGGGCGGTG CGGCCGTCAT GCAGGAGCAG
CGCGAAGTCG ACGCTGCCGA CCTGCCGTTC GAGTTCATGC TCAATGCGCT GCGACTGACG
GACGGTTTTC CCGTCACGCT GTTCCAGGAA CGCACGGGCC TGCCGCTGCG CTCCATTGAG
CGACAACTCG ACGCCGCCGA GCAGCGCGGC CTGCTGACGC GCGACCATGT CGCCATCCGC
CCGACCGAAC TGGGACAGCG ATTCCTCAAC GATTTGCAGG AATTGTTCTT GGCCGACGAC
GAAAACTGA
|
|---|
| Protein sequence | MIPIYPAGAA KTPAATAAET GDKVTSVFLQ PGKINLPASP PLSLYVHVPW CVRKCPYCDF
NSHAEPEQGI PEERFLAAVR QDLEAALPMV WGRHVHTIFI GGGTPSLLSA QGLDRLLSDI
RMLLPVDADA EITMEANPGT FEAERFRSYR ASGVNRLSIG IQSFNDAYLQ ALGRIHSAAE
ARAAIDMARA HFDNINLDLM FALPGQTLAE CEADVEAALS FDTNHVSLYH LTLEPNTYFA
KYPPALPDDD AAFAMQDWIH ARLAAAGYEH YEVSAYAKAG KRCKHNLNYW QFGDYLGIGP
GAHGKLSFPH RVIREMRHKH PDTYLRQAET AGGAAVMQEQ REVDAADLPF EFMLNALRLT
DGFPVTLFQE RTGLPLRSIE RQLDAAEQRG LLTRDHVAIR PTELGQRFLN DLQELFLADD
EN
|
|---|
| |