Gene Rpic_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2281 
Symbol 
ID6287156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2401095 
End bp2401700 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID642625855 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_001899847 
Protein GI187929360 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.937664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.840313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA TCGTTCTCGC ATCAAACAAC GCCGGCAAGC TGGCCGAGTT CAACACGCTG 
CTGGGCACCC TCGGGTTCGA CGTGACGCCG CAAGGCGCGC TCGGCATTCC CGAGGCGGAA
GAGCCCTATG CGACGTTCGT TGAAAACGCG CTCACCAAGG CGCGCCACGC GAGCCGTGCG
TCGGGCCTGC CTGCGTTGGC AGACGACTCC GGCATCTGCG TGCATGCGTT GGGCGGCGCG
CCGGGCGTGT ATTCCGCGCG CTATGCGCAA CTGGTGGGCG AGCCCAAATC GGACGCCGCC
AACAACGCCC GCCTCGTCCG CGAACTGGTC GGCAAAGCGG ATCGCGGAGC ACACTATGTT
TGCGTGCTTG TCTACGTGCG CCATGCCGAT GACCCGCAGC CGATCATTGC CGAAGGCAAC
TGGTTTGGCG AGGTGATCGA CACACCGCGC GGCGACGGCG GCTTCGGCTA CGACCCACAC
TTCCTGCTGC CCAATCTCGG CAAGACCGCC GCCGAACTGA CCAAGGCCGA GAAGAACAGC
GTGAGCCATC GTGCACAAGC CCTCGCGCAG CTCGTCGAAC GGCTGCGCAC CTTTGAAAAC
GCCTGA
 
Protein sequence
MRKIVLASNN AGKLAEFNTL LGTLGFDVTP QGALGIPEAE EPYATFVENA LTKARHASRA 
SGLPALADDS GICVHALGGA PGVYSARYAQ LVGEPKSDAA NNARLVRELV GKADRGAHYV
CVLVYVRHAD DPQPIIAEGN WFGEVIDTPR GDGGFGYDPH FLLPNLGKTA AELTKAEKNS
VSHRAQALAQ LVERLRTFEN A