Gene Rpic_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2273 
SymbolgreB 
ID6289066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2392509 
End bp2393072 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID642625846 
Producttranscription elongation factor GreB 
Protein accessionYP_001899839 
Protein GI187929352 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.112625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.859222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGG CTTTCGTCCG GGAAGATTCC GGCGACGATG AAGACGATCT GCCCGAGGGC 
GCTGCGCCCT TGCCGCCGGG TTCCAAGAAC TACATCACGC CGGCGGGCTA CGAGCGCCTG
CGCACCGAGC TGATGCACCT GATCGACACC GAGCGGCCCG AAGTGGTTGG CATCGTGTCG
TGGGCGGCAT CCAATGGTGA TCGCTCCGAA AACGGCGACT ACCTTTACGG CAAGAAGCGC
CTGCGTGAGA TCGATCGTCG CATCCGCTTT CTCACGCGCC GTATCGAGAA GGCCGAGGTT
GTCGACGCCA GCTTGCAGGG CGACAACGAT CAGATCTTCT TTGGCGCGAC GGTTACCTAC
GCCAACCAGC GTGGTGAAGA GAAGACGATC ACCATCGTCG GCATGGACGA GGTGGATCTG
GACATCGGGC ACGTGAGCTG GATCTCGCCG ATTGCGCGTG CGCTCATCAA GGCGCGCGTG
GGCGATACGG TGCCGCTGCG CACGCCCACA GGTGTCGAGC AGATCGACAT CCTCGAAGTC
AAATATCCGC CGCGCACCGC CTGA
 
Protein sequence
MNKAFVREDS GDDEDDLPEG AAPLPPGSKN YITPAGYERL RTELMHLIDT ERPEVVGIVS 
WAASNGDRSE NGDYLYGKKR LREIDRRIRF LTRRIEKAEV VDASLQGDND QIFFGATVTY
ANQRGEEKTI TIVGMDEVDL DIGHVSWISP IARALIKARV GDTVPLRTPT GVEQIDILEV
KYPPRTA