Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2263 |
Symbol | |
ID | 6289255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2380405 |
End bp | 2382726 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642625835 |
Product | malic enzyme |
Protein accession | YP_001899829 |
Protein GI | 187929342 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.828164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA AGCTTCACGA CGCCTCGCCG GATTCCCAAG ACCAAGGCGC CGAGGCCGAA CTGCGCCGCG CAGCGTTTGA ATATCACCGC GCCCCCACGC GCGGCAAGAT TGAGGTTCGC CCGACCAAGG CGCTGATCAA CCAGCGTGAT CTTTCGCTGG CGTATTCGCC GGGCGTGGCA TATCCGTGTA CCGCGATCGA GCAAGACCCG TCGCTGGCGG CGGAGTACAC GTCGCGCGGC AACCTGGTCG GCGTGATCAC CAACGGCACC GCGGTGCTGG GTCTGGGCGA CATCGGCCCG CTGGCCAGCA AGCCCGTCAT GGAAGGCAAG GGCTGCCTGT TCAAGAAGTT TGCCGGCGTG GACGTGTTCG ATATCGAACT GGCCGAGCGC GATCCGGACA AGCTCGTTGA CATCATCGCC TCGCTGGAGC CGACGCTGGG CGGGATCAAC CTCGAAGACA TCAAGGCGCC GGAGTGCTTC TACATCGAGC AGAAGCTGCG TGACCGCCTG AATATTCCCG TTTTCCACGA TGACCAGCAC GGCACGGCGA TCATCTCGTC GGCTGCCCTG CTCAACGGCC TGAAGGTCGT CGGCAAGGAC ATCGGCAATG TGAAGGTGGC CGTGTCGGGT GCGGGCGCCG CGGCCATCGC CTGCCTGGAC GTGATGGTCG GCCTGGGCGT CAAGCGCGAG AACGTCTACG TAGTCGACTC CAAGGGCGTG ATCTACGCCG GCCGCGACGC CAAGATGGAG CCGAACAAGG CGCGCTATGC GCAAGACACG TCGGCCCGTA CGCTGGCCGA CATCGTGCGC GATGCAGACG TGTTCTTGGG TTGCTCGGCC GCCGGCGTGC TGACCGCCGA CATGGTCAAG ACCATGGCGC CGAAGCCGAT CATCCTGGCG CTGGCCAATC CCGAGCCGGA AATCCGCCCG GAAGTGGCCA AAGCCGCGCG CCCGGACTGC ATCATCGCTA CGGGCCGCTC GGACTACCCG AACCAGGTCA ACAACGTGCT GTGCTTCCCG TATATCTTCC GCGGTGCGCT CGATTGCGGC GCCACCAAGA TCACGGAAGA GATGAAGCTG GCATGCGTGA AGGCCATTGC CGAGCTGGCA GAAGCCGAAA CGAACGATGC CGTGGCGCAG GCTTATGCCG GCCAGGACCT GACCTTCGGC CCGGATTACA TCATCCCGAA GCCGTTCGAT TCGCGCCTGA TCGAGAAGAT CGCGCCGGCC GTCGCCAAGG CCGCGGAAGA GTCTGGCGTG GCCACGCGCC CGATCAAGGA TCTGGACGCC TATCGCGCCC AGCTGAGCGA CTTCGTGTAC CACACGGGCC TGACCATGCG CCCGGTGTTC TCGGCCGCCA AGGCCAACCC GAAGCGCGTC GTCTACGCCG AAGGTGAAGA AGAGCGCGTG CTGCGCGCGG TGCAGACGGT GGTGGACGAA GGCCTGGCCA AGCCGATCCT GATCGGCCGT CCGCACGTGA TCGAAATGCG CATCCAGAAG GCCGGCCTGC GCCTGAAGCC GGGGGTGCAT TTCGAGCTGG TCGATCCGGA AGACGACCGC CGCTATCACC AGTACCACAC CGCTTACCAC GAGCTGATGG GCCGCAACGG CGTGACGCCG GACATGGCGA AGTCGGCGCT GCGCCGTTCG AACACGCTGA TCGGTGCACT GCTGGTGCGC CTGGGTGATG CCGATGCGCT GCTGTGCGGC ACGGTTGGCC GCTTCGACGC CCACCTGGAA CACGTGCGTG ACGTGATCGG CCTGGCCCCG AATGCCAAGG TGTTCGCCGC CATGAACGGC CTGATGCTGG AGAAGCACAC GCTGTTCATC ACCGATACGT TCGTCAACGA GCTGCCGAGC GCAGAAGAGC TGGCCGACAT CACCAAGCTG GCGGCAGAAG AAGTGCGCCG TTTCGGCCAG GAGCCGAAGG TGGCGATGCT GTCGCACTCG ATGTTCGGCT CGTCGAAAAA CGCATCGGCC CGCCGCATGC GCGCTGCGTA TGACCTGCTG AAGGTGGAAG CGCCCGACCT GCAGGTGGAA GGCGAGATCC AGGGTGACGC GGCACTGTCG GAAGACATCC GCCATCATTT CCTGCCGAAG AGCGCGTTCT CGGGTAGCGC AAACCTGCTG GTGATGCCGT CGCTCGACGC CGCCAACATC GCGTTCAACC TGCTCAAGAT CACGGGCGGG CAGGGCGTGA CGGTGGGCCC GATCCTGCTG GGCGCGGCCA AGCCGGTGCA CATCCTGAAC CCGTCGGCCA CGTCGCGCCG CATCGTCAAC ATGACGGCGC TGGCGGTGGC AGACGTGTCG GCTACGCGTT GA
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Protein sequence | MNDKLHDASP DSQDQGAEAE LRRAAFEYHR APTRGKIEVR PTKALINQRD LSLAYSPGVA YPCTAIEQDP SLAAEYTSRG NLVGVITNGT AVLGLGDIGP LASKPVMEGK GCLFKKFAGV DVFDIELAER DPDKLVDIIA SLEPTLGGIN LEDIKAPECF YIEQKLRDRL NIPVFHDDQH GTAIISSAAL LNGLKVVGKD IGNVKVAVSG AGAAAIACLD VMVGLGVKRE NVYVVDSKGV IYAGRDAKME PNKARYAQDT SARTLADIVR DADVFLGCSA AGVLTADMVK TMAPKPIILA LANPEPEIRP EVAKAARPDC IIATGRSDYP NQVNNVLCFP YIFRGALDCG ATKITEEMKL ACVKAIAELA EAETNDAVAQ AYAGQDLTFG PDYIIPKPFD SRLIEKIAPA VAKAAEESGV ATRPIKDLDA YRAQLSDFVY HTGLTMRPVF SAAKANPKRV VYAEGEEERV LRAVQTVVDE GLAKPILIGR PHVIEMRIQK AGLRLKPGVH FELVDPEDDR RYHQYHTAYH ELMGRNGVTP DMAKSALRRS NTLIGALLVR LGDADALLCG TVGRFDAHLE HVRDVIGLAP NAKVFAAMNG LMLEKHTLFI TDTFVNELPS AEELADITKL AAEEVRRFGQ EPKVAMLSHS MFGSSKNASA RRMRAAYDLL KVEAPDLQVE GEIQGDAALS EDIRHHFLPK SAFSGSANLL VMPSLDAANI AFNLLKITGG QGVTVGPILL GAAKPVHILN PSATSRRIVN MTALAVADVS ATR
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