Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2261 |
Symbol | |
ID | 6289358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2378559 |
End bp | 2379083 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642625833 |
Product | hypothetical protein |
Protein accession | YP_001899827 |
Protein GI | 187929340 |
COG category | [S] Function unknown |
COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03164] OHCU decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.351618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAGA CCACCTACAC CCTCTCGCAA CTCAACGGCA TGGACGCGTC GCAGTTCGTG CAAGTCCTCG GCGGCGTCTA CGAGCACTCC CCGTGGGTTG CCGAACAGGC CGCCACGCAG CGCCCGTTCG CCTCGGCCGA GGCGCTCGCG GCTGCCATGC GCAATGCCGT GGACACCGCC GGCATTGAGC CGCAGCTCAA GCTCGTGCGC GCTCACCCCG AGCTGGCGGG CAAGGCGGCC GTGCGCGGTG AACTGACCGC CGAGTCGACG CGCGAGCAAA GTGGTGCGGG CCTGAACCAG TGCTCGCCGG AAGAGTTTGC ACGCCTGCAG GCCCTCAACG CGCAGTACAA CGAGAAGTTC GGCTTTCCGT TCATCCTGGC GGTGCGCAGC TATGACCGCC ACGGCATCAT CGACAACTTC AGCGAGCGCG TGGAAAACGA CCGCGATACC GAGCTGCGTG CATCGCTCGA ACAGATTCAT CGCATCGCGG GTTTCCGTCT GGCCGATTTG ATCGCCGCCA ACTGA
|
Protein sequence | MSQTTYTLSQ LNGMDASQFV QVLGGVYEHS PWVAEQAATQ RPFASAEALA AAMRNAVDTA GIEPQLKLVR AHPELAGKAA VRGELTAEST REQSGAGLNQ CSPEEFARLQ ALNAQYNEKF GFPFILAVRS YDRHGIIDNF SERVENDRDT ELRASLEQIH RIAGFRLADL IAAN
|
| |