| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2224 |
|---|
| Symbol | |
|---|
| ID | 6288399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2335267 |
|---|
| End bp | 2336139 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642625796 |
|---|
| Product | CDP-diacylglycerol/serine O-phosphatidyltransferase |
|---|
| Protein accession | YP_001899790 |
|---|
| Protein GI | 187929303 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1183] Phosphatidylserine synthase |
|---|
| TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.367429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGT TCAACCGACG CAAGAAGCGT TTTACCGCCG GCAACGTGAC GCACCTGCGT
CCGCTGCGGC ACAACCAGCC GCGCTCGGAT GACGACGATC TGGAGATCGT GCGTCCGCGC
CGCAGAGGCA TCTATCTGCT ACCCAACGCG TTCACGACGG CCGCGCTGTT CGCCGGCTTC
TTCGCCATCG TGCAGGCGAT GAACCTGAAC TTTGAGACGG CCGCGATCGC CATCTTTGCG
GCGATGGTGC TCGATGGCAT GGACGGCCGC GTCGCCCGCA TCACCAATAC CCAGAGCGCG
TTCGGCGAGC AATACGACTC GCTGTCGGAC ATGGTGTCCT TCGGCGTAGC GCCGGCGTTG
GTCATGTATG AATGGATCCT GCGCGATCTG GGCAAGTGGG GCTGGCTCGC TGCGTTCGTG
TATTGCGCCG GCGCTGCATT GCGTCTCGCG CGCTTCAACA CGAACATCGG ATCGGTCGAC
AAGCGCTTCT TCCAGGGCAT GCCTAGCCCG GCCGCCGCTG CGCTCATCGC AGGTTTTGTC
TGGCTGGCGA TCGACAACAA GCTGCCGGTC AAAGAGCTGT GGATGCCGTG GGTAGCCTTC
GGGCTGACGC TGTATGCAGG GCTGTCGATG GTGTCGAACG CGCCGTTTTA CAGCGGCAAG
GCGCTCGATG TTCGCCACCG CGTACCGTTC GGCGTGATGG TGCTCGTGCT TGTGTTATTC
GTCGTGATAT CCAGCGATCC GCCGGTGGCG TTGTTCGGCC TGTTTGTTGG CTACGCGGTG
TCGGGCTACC TGCTGTGGGG GTGGCGCGCG CTGCATGGGC AACAAGGTAG CCCCCGTTTG
CCAAAGCAGG CATCGGACGA AGCACATGAG TGA
|
|---|
| Protein sequence | MPAFNRRKKR FTAGNVTHLR PLRHNQPRSD DDDLEIVRPR RRGIYLLPNA FTTAALFAGF
FAIVQAMNLN FETAAIAIFA AMVLDGMDGR VARITNTQSA FGEQYDSLSD MVSFGVAPAL
VMYEWILRDL GKWGWLAAFV YCAGAALRLA RFNTNIGSVD KRFFQGMPSP AAAALIAGFV
WLAIDNKLPV KELWMPWVAF GLTLYAGLSM VSNAPFYSGK ALDVRHRVPF GVMVLVLVLF
VVISSDPPVA LFGLFVGYAV SGYLLWGWRA LHGQQGSPRL PKQASDEAHE
|
|---|
| |