| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2223 |
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| Symbol | |
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| ID | 6288398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2333409 |
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| End bp | 2334950 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625795 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001899789 |
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| Protein GI | 187929302 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.556121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA AACTGATCAT TTTCGATACC ACCTTGCGCG ACGGCGAGCA GTCCCCCGGG
GCGTCGATGA CCAAGGAAGA GAAGATCCGC ATCGCCAAGC AGCTGGAGCG GCTCAAGGTG
GACGTGATCG AGGCCGGTTT TGCGGCCAGC TCCAATGGTG ACTTCGAGGC GATCCGCGCG
ATTGCGCAGT CGGTCAAGGA TTCGCGCATT TGCTCGCTGG CCCGTGCGAA CGACCGTGAT
ATTTCCCGCG CTGCCGAGGC GCTCAAGCCG GCGGGGCAGT TCCGCATCCA CACGTTCATC
GCCACATCGG CGCTGCACAT GGAAAAGAAG CTGCGCATGT CGCCGGATCA GGTGTACGAG
CAGGCGCGCC TGGCGGTGCG TTTCGCGCGC CAGTTCACCG ATGACATCGA GTTCTCGCCG
GAAGATGGCA GCCGCTCCGA TATGGATTTC CTCTGCCGCG TGCTGGAAGG CGTGATCGCC
GAGGGCGCCA CCACCATCAA CCTGCCGGAT ACGGTGGGCT ACGCGGTGCC GGAAGGTTAT
GCCGCCCTGA TCCGCTCGGT GCGCGAGCGC ATCCCGAATT CCGACAAGGC GGTCTGGTCG
GTGCATTGCC ATAACGACCT GGGCATGGCG GTCGCCAACT CCCTGGCCGC TGTCAAACTG
GGCGGCGCAC GCCAGATTGA ATGCACGATC AACGGCCTGG GCGAGCGCGC CGGCAACACC
AGCCTCGAAG AGGTGGTGAT GGCCGTGAAG ACGCGCCGCG ACTACTTCAA TCTCGACGTG
GGTGTCGATA CCACGCAGAT CGTGCCGGCT TCCAAGCTGG TCTCGCAGAT CACCGGTTTC
GTTGTGCAGC CGAACAAGGC TGTCGTGGGC GCCAACGCTT TCGCGCACGC TTCGGGCATC
CACCAGGATG GCGTGCTCAA GGCGCGCGAC ACGTACGAAA TCATGCGTGC CGAAGACGTG
GGCTGGACGG CCAACAAGAT CGTCCTGGGC AAACTCTCGG GCCGCAACGC GTTCAAGCAG
CGTCTGCAGG AACTGGGCAT TGAACTGGAT TCGGAAGCCG AACTGAACGC TGCCTTCACC
CGCTTCAAGG AGCTGGCCGA TCAGAAGGCT GAGATCTTCG ACGAAGACAT CGTCGCCATC
GTCTCGAACG AAGCGCAGCA CAGCGAGGGC GAGCACTTCC GTTTCGTGTC GCTGGCCCAG
CGTTCGGAAA CCGGCGAGCG TCCGCACGCG CGCATCGTCT TCGTCGCGGA TGGCAAGGAA
GTGACGGGTG AAGCGGAGGG CAATGGCCCG GTTGACGCCA CGCTCAATGC GATTGAGAGC
AAGGTCGCCA GCGGCGCCGA GCAACTGCTG TATTCGGTCA ACGCCATCAC GACGGGCACG
CAGGCGCAGG GCGAAGTGAC GGTGCGCCTG TCCAAGTCGG GCCGTATCGT CAACGGTGTG
GGTACTGACC CGGACATCGT TGCGGCTTCG GCCAAGGCTT ACCTTGCCGC TCTGAACAAG
CTGCAGGACA AGAGCAGCGA AAAACTCAAC CCGCAGATCT GA
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| Protein sequence | MSDKLIIFDT TLRDGEQSPG ASMTKEEKIR IAKQLERLKV DVIEAGFAAS SNGDFEAIRA
IAQSVKDSRI CSLARANDRD ISRAAEALKP AGQFRIHTFI ATSALHMEKK LRMSPDQVYE
QARLAVRFAR QFTDDIEFSP EDGSRSDMDF LCRVLEGVIA EGATTINLPD TVGYAVPEGY
AALIRSVRER IPNSDKAVWS VHCHNDLGMA VANSLAAVKL GGARQIECTI NGLGERAGNT
SLEEVVMAVK TRRDYFNLDV GVDTTQIVPA SKLVSQITGF VVQPNKAVVG ANAFAHASGI
HQDGVLKARD TYEIMRAEDV GWTANKIVLG KLSGRNAFKQ RLQELGIELD SEAELNAAFT
RFKELADQKA EIFDEDIVAI VSNEAQHSEG EHFRFVSLAQ RSETGERPHA RIVFVADGKE
VTGEAEGNGP VDATLNAIES KVASGAEQLL YSVNAITTGT QAQGEVTVRL SKSGRIVNGV
GTDPDIVAAS AKAYLAALNK LQDKSSEKLN PQI
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