Gene Rpic_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2207 
Symbol 
ID6288404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2316501 
End bp2317565 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content60% 
IMG OID642625778 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_001899773 
Protein GI187929286 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT CGATTACTTC TTTCGGTACC GCCACCTTCG GTGGCTGGTG GCCGCTGGTC 
TGGACGCTGG TCCGTGCGGT CTGCATCATT CTGCCGCTGC TGCTGTGCGT GGCTTACCTG
ATCCTGTGGG AGCGCAAGCT CATCGGCTGG ATGCACGTGC GTCTGGGCCC GAACCGCGTG
GGCCCGATGG GCCTGCTGCA GCCGATTGCC GACGTGCTCA AGCTGCTGCT CAAGGAAGTC
ATGGTGCCGA GCGCGGTCAG CCGTGGCATG TACATCATCG CGCCGCTGAT GGTGCTGATG
CCCGCCGTGG CGATCTGGGC GGTGATTCCG TTCCAGGCCG AGGCGATGGT GTCGAACATC
AACGCTGGCC TGCTGTACGT GATGGCGATC AGCTCGGTGG GCGTATACGG CGTGATTCTG
GCGGGCTGGG CTTCGAACTC GAAGTACGCG TTCCTGGGTG CGATGCGTGC TTCGGCACAA
ATGATTTCGT ACGAAATCGC CATGGGCTTC GCGCTCGTGA CCGTGCTGAT GGTAACGGGC
AGCCTGAACC TGTCGGACAT CGTCAACTCG CAGAACCGCG GTTTCTTTGC AGGTCACGGT
ATCAACATCC TGTCGTGGAA CTGGCTGCCG CTGCTGCCGA TGTTCGGCGT CTACTTCATC
TCGGGTGTAG CTGAAACGAA CCGCCATCCG TTTGACGTGG TGGAAGGTGA ATCCGAAATC
GTGGCCGGCC ACATGATCGA ATACTCGGGC ATGGCGTTCG CGCTGTTCTT CCTGGCCGAG
TACATCAACA TGATCGTGAT CTCGGCGCTG ACGGCGACGC TGTTCCTGGG CGGCTGGGCT
TCGCCGATCG ACGCACCGGT CCTCAACTGG ATTCCGGGCT TCTTCTGGCT GCTGATCAAG
GTTTTCCTGC TGCTGTCGGT CTTCATCTGG CTGCGTGCAT CGTTCCCGCG TTATCGCTAT
GACCAGATCA TGCGTCTGGG CTGGAAGATC TTCATTCCGC TCACTGTGGG CTGGCTTGTC
GTCGTCGCCA TCTGGTTGGT GTCGCCGTGG AACATCTGGA AGTAA
 
Protein sequence
MIESITSFGT ATFGGWWPLV WTLVRAVCII LPLLLCVAYL ILWERKLIGW MHVRLGPNRV 
GPMGLLQPIA DVLKLLLKEV MVPSAVSRGM YIIAPLMVLM PAVAIWAVIP FQAEAMVSNI
NAGLLYVMAI SSVGVYGVIL AGWASNSKYA FLGAMRASAQ MISYEIAMGF ALVTVLMVTG
SLNLSDIVNS QNRGFFAGHG INILSWNWLP LLPMFGVYFI SGVAETNRHP FDVVEGESEI
VAGHMIEYSG MAFALFFLAE YINMIVISAL TATLFLGGWA SPIDAPVLNW IPGFFWLLIK
VFLLLSVFIW LRASFPRYRY DQIMRLGWKI FIPLTVGWLV VVAIWLVSPW NIWK