| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2189 |
|---|
| Symbol | |
|---|
| ID | 6288960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2298769 |
|---|
| End bp | 2299461 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642625760 |
|---|
| Product | urea ABC transporter, ATP-binding protein UrtE |
|---|
| Protein accession | YP_001899755 |
|---|
| Protein GI | 187929268 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.113026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAGG TCCAACAACT GAACCAGTTC TACGGCGGCA GCCACATCCT GCGCAACGTC
AGCTTTGACG TCCCCACGGG CAAGCTGACC ACGCTGCTTG GCCGTAACGG CGTGGGCAAG
ACGACGCTGC TCAAATGCTT GATGGGGGTG GTGCCCACCG CCAGCGGTGC GATCGATTGG
GAAGGGCGCA CCATCCAGAA ACTGCCCGCG TACGAGCGTG TCTCGCAGGG GCTCGCCTAT
GTGCCGCAGG GCCGCGAGAT CTTCCCGCGC CTGACGGTGG AAGAGAACCT GCTGATTGGT
GCGGCCGCCA AGCGTGCGCC GTCCAAGGTG CCCGATTTCA TCTACGAGCT GTTTCCGGTG
CTCAAGGAGA TGAAGGGCCG GCGCGGCGGT GATCTGTCCG GCGGCCAGCA GCAGCAACTT
GCCATCGGCC GCGCGCTGAT GAGCGAGCCG CGCCTGCTGA TCCTGGACGA GCCGACCGAG
GGCATCCAGC CGTCGATCAT CCAGGAGATC GGCCGAACGC TGCGGCGCCT TGTCGATGAG
TTCGGCATGT CGGTGCTGCT GGTCGAGCAG TACTACGACT TTGCGCGCAG CATTGCCGAC
CGCTATGTCG TCATGAGCCG CGGCGAGGTC ATCGCCCAGG GCGACGGCGC CAATATGGAA
GCCGATGGCG TGCGTGATCT GGTGGCCGTC TGA
|
|---|
| Protein sequence | MLQVQQLNQF YGGSHILRNV SFDVPTGKLT TLLGRNGVGK TTLLKCLMGV VPTASGAIDW
EGRTIQKLPA YERVSQGLAY VPQGREIFPR LTVEENLLIG AAAKRAPSKV PDFIYELFPV
LKEMKGRRGG DLSGGQQQQL AIGRALMSEP RLLILDEPTE GIQPSIIQEI GRTLRRLVDE
FGMSVLLVEQ YYDFARSIAD RYVVMSRGEV IAQGDGANME ADGVRDLVAV
|
|---|
| |