Gene Rpic_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2186 
Symbol 
ID6289149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2296737 
End bp2297354 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content70% 
IMG OID642625757 
ProductHupE/UreJ protein 
Protein accessionYP_001899752 
Protein GI187929265 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.114509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTA CCCTGTCTCG CTTCGTCCGG CCCGCTGCGG CCATTGCGCT CACGTTTGGC 
GCCTCTGTTG CCTTCGCTCA CCCGGGGCAT CCGGGCCATA CCGCCGAGGG CAGCCTGCTC
GCGGGGTTCC TGCATCCGCT CACCGGTGCA GATCACCTCC TGGCGATGGT GGCCGTGGGT
GTGTGGAGCG CACTGGCCTC GCGCTCGGTG CGCGACGCGT TGTGGGCGCC GGTCGCCTTT
GTCGCGTTGA TGATCCTGGG CGCGCTGCTC GGCGCCGGCG GCGGGGCGCT GCCGATGGCT
GAGCCGATGA TTGCCGCATC GCTGCTGGTG TTCGGCCTGC TGATTGCCGC ACGCGCGCAG
CTGCCGACCT GGGGCGGTGC ACTGCTGTGC GGCGCGTTCG CGCTGTTCCA CGGCTATGCG
CACGGCACGG AATTCCCCGC AGGCGCGCAG GCCATGTTCC CGTATTTCGT TGGCGGCTTT
GCCGTGGCGA CGGCGCTGCT GCATACCGCC GGCATCGGCG CGGGCTTTGC ACTGAAGCCG
CGCATGGCGT GGCTGGCGCG TCTGTCGGGT GTGGGTGTGG CGCTGTACGG CGCAGGCCTG
CTGGTTACGG CGATCTGA
 
Protein sequence
MTPTLSRFVR PAAAIALTFG ASVAFAHPGH PGHTAEGSLL AGFLHPLTGA DHLLAMVAVG 
VWSALASRSV RDALWAPVAF VALMILGALL GAGGGALPMA EPMIAASLLV FGLLIAARAQ
LPTWGGALLC GAFALFHGYA HGTEFPAGAQ AMFPYFVGGF AVATALLHTA GIGAGFALKP
RMAWLARLSG VGVALYGAGL LVTAI