Gene Rpic_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2182 
Symbol 
ID6287333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2293191 
End bp2293880 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID642625753 
ProductUrease accessory protein UreF 
Protein accessionYP_001899748 
Protein GI187929261 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.349664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.124246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACG CGGCGCAGCT CACCGCCTTG CTGCATCTCG CGTCCCCGGC GCTGCCGGTG 
GGCGCGTTCA GCTATTCGCA GGGGCTGGAG GCGGCGGTGG ATGTGCGGCG CGTGGCGGAC
GAAGCGTCGG CTGCCGCGTG GATTGCCGAG GGGCTCGACG TGCTCGCCGC ATGCGAGGCA
CCGCTATGGC TGCTGCAGTT TGCCGACTGG CAGGCAGGCC GCTTCGATGC CGTTGCCGAG
CGCGATGCGT GGTTCCTCGC CACCCGCGAG ACGCGCGAGC TGCGGCTCGA AACGTCTCAG
ATGGGCTGGT CGCTCAATCG CCTCATCCAG CAGATGGCGT GGGGCGATGA CGCACTGCGC
AGTGCCTTGG CCGCATGCGC TTCGGTGACG TTTCCGACCG CGTTTGCCGC CGCTGCTGCC
GCGCTGAATG TCGACCCGCG CGATGGCGTG ACGGCGTACT GCTTTGCCTG GGTGGAAAAC
CAGATGGCGG CGGCAGTCAA GGCCGTGCCG CTCGGGCAGG CTGCGGGGCA ACGGATTCTC
TTTGGCCTGC ACGCAGCGGT GGCGCGTGCG GTGGAGGAGG CGACACGCCG CGCGGCCTGT
CATCCGCCTG AACTGTCTAC GTTTTCGCCG GGGCTGGGCG TGCTGTCCGC CCGGCATGAA
ACGCAATACT CACGACTCTT TCGTTCCTGA
 
Protein sequence
MTNAAQLTAL LHLASPALPV GAFSYSQGLE AAVDVRRVAD EASAAAWIAE GLDVLAACEA 
PLWLLQFADW QAGRFDAVAE RDAWFLATRE TRELRLETSQ MGWSLNRLIQ QMAWGDDALR
SALAACASVT FPTAFAAAAA ALNVDPRDGV TAYCFAWVEN QMAAAVKAVP LGQAAGQRIL
FGLHAAVARA VEEATRRAAC HPPELSTFSP GLGVLSARHE TQYSRLFRS