Gene Rpic_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2178 
Symbol 
ID6289861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2290703 
End bp2291395 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content61% 
IMG OID642625749 
ProductGlutathione S-transferase domain 
Protein accessionYP_001899744 
Protein GI187929257 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0564194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG TCTATAGCTG GGCCACGCCC AACGGGCACA AAGTGCACAT CATGCTGGAA 
GAATGCGAGC TGCCTTACCG CGTTCACGGC ATCAACATCG GCGCCGGCGA CCAGTTCAAG
CCCGACTTCC TCAAGATCAG CCCCAACAAC AAGATCCCGG CCATCGTCGA TCAGGATGGC
CCCGACGGCA AACCGATCTC GCTGTTCGAA TCGGGCGCGA TCCTGCTGTA CCTCGCCGGC
AAGACCGGCA AGTTCCTGCC CGACGACGTG CGTGGCAAAT ACGAAGTGCT GCAGTGGCTG
ATGTTCCAGA TGGGCGGCGT CGGCCCGATG CTCGGCCAGG CGCACCACTT CCGCATCTAC
GCGCCCGAGA AGATCGAATA CGCGATCAAC CGCTATACGA ACGAAGCCAA GCGACTGTAC
GGCGTGATCG ACAAGCGCCT GGGCGAATCC AAGTACCTCG GCGGCGCGGA GTACTCCATC
GCCGACATCG CCACGTGGCC GTGGCTGCGC AGTTGGAAGA ACCAGGGGAT CGAACTGTCG
GACTACCCCA AGCTGCAGCG CTGGTTTGAA GCCATTGAAG AACGCCCCGC CGTGCAGCGC
GCGGTGAAAG TGCTGGCCAA GGAACGGCCG GCTGTGCAGG ACGACAAGGC AAATGAAATC
CTGTTTGGCG CCACGCAGTA TCAGCGCCGT TGA
 
Protein sequence
MIDVYSWATP NGHKVHIMLE ECELPYRVHG INIGAGDQFK PDFLKISPNN KIPAIVDQDG 
PDGKPISLFE SGAILLYLAG KTGKFLPDDV RGKYEVLQWL MFQMGGVGPM LGQAHHFRIY
APEKIEYAIN RYTNEAKRLY GVIDKRLGES KYLGGAEYSI ADIATWPWLR SWKNQGIELS
DYPKLQRWFE AIEERPAVQR AVKVLAKERP AVQDDKANEI LFGATQYQRR