| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2168 |
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| Symbol | |
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| ID | 6286813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2281097 |
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| End bp | 2282605 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642625739 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_001899734 |
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| Protein GI | 187929247 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0779654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0290069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACTA TCGGGATTGT GGGCACCGGC GCCATGGGGC GCGGCATTGC ACAGATCGCG
GCCCAGGCAG GTTTGCGCGT CAAACTGTTC GACGCCAATC CGCAAGCCGT GGAAGCGGCG
CGCACGGCGC TGGCCGACAC GCTGGCCAAG CTGGCCGCCA AGGGCAAGCT CACAGCAGAT
GAAGCTGACG CCACAATCGC CCGCCTGATT CCGGCCGGCG CCCTCTCCGA CCTGGCCGAC
TGCGATCTGG TGGTCGAGGC CATCGTCGAG AAGCTCGACG TCAAGCGCGA CCTCTTCCGT
CAACTCGAAG ACATCGTCCG CGCGGATGCC ATCCTGGCGT CGAATACCTC ATCGCTGTCG
ATCACCGCGA TTGCCGCGAC ATGCAAACAC CCGGAGCGCG TCGCTGGTTT CCACTTCTTC
AACCCGGTTC CGCTGATGAA GGTGGTCGAA GTCATCGACG GCCTGCGCAG CGCACCCGCC
ACCGGTGACG CCCTGGCCGC ACTGGCCAAG CGCATGGGTC ACACCGCCGT GCGCTGCATC
GACATGCCGG GCTTCATCGT CAACCACGCC GGGCGCGGCA TGAATACCGA AGGGCTGCGC
GTGGCGCAGG AAAGTGTGGC GGCCTATGCG GACATCGACG CCATCATGCG CGAGCAGGCC
GGCTTCCGCA TGGGGCCGTT CGAGTTGATG GACCTCACAG GGCTGGATGT TTCGCACCCG
GTGATGGAAT CGGTCTACCG CCAGTTCTAC GACGAGCCGC GCTATCGTCC GTCGCAGATC
ACGGCGTTGC GCTTTGCCGG CAGCATTCTG GGCCGCAAGA CGGGCGAAGG GTTCTACCGC
TATCCGGAAG GACAGAAACA GGTGCCGGCT GAAGCGCCCG CCCCGTCCGC GCGCCCGTCT
TCAGTGTGGA TCAGCCGCGC GCATGACGCC GGCCACGCCG CAGCGCAGCG CCTGTTGCTC
GATCTGGGCA TTACGCCCGA AGGCGGTTCC AAACCGTCCG CCGACGCATT GATCATCGTC
ACGCCGCGCG GGCTGGATGC CACGGCCTGC GTGACCGCCG AGGGGCTCGA CGCACGCCGC
ACCGTGGCGC TCGACACGCT CTATCCGTTT GCCGCCACCA AGCGCCGCAC GCTGATGACC
ACACCCGCCA CCGACGCAGC CTACCGCGAT GCCGCACACG GCTTGCTCGC GTCCGACGGC
GTACCGGTCA CGGTGATCCG CGATTCGGGT GGCTTTGTCG CGCAGCGCAT CGTCGCATGC
ATCGTCAACA TCGCGTGCGA TATCGCACAG CAGCGCATTG CTACGCCCAC CGACATCGAC
CTCGCCGTCA CGCTGGGGCT CGGTTATCCC AAAGGGCCGC TGGCACTCGG CGATACGCTG
GGCACGAACG CCATCCTGGA AGTCCTGCAG AATCTCTACG CGCTTTATGG CGATCCGCGC
TATCGCCCGA GCCCGTGGCT GCTGCGCCGT GCCCGTCTGG GCATGTCGCT GCTCACGCCT
GATGCCTGA
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| Protein sequence | MQTIGIVGTG AMGRGIAQIA AQAGLRVKLF DANPQAVEAA RTALADTLAK LAAKGKLTAD
EADATIARLI PAGALSDLAD CDLVVEAIVE KLDVKRDLFR QLEDIVRADA ILASNTSSLS
ITAIAATCKH PERVAGFHFF NPVPLMKVVE VIDGLRSAPA TGDALAALAK RMGHTAVRCI
DMPGFIVNHA GRGMNTEGLR VAQESVAAYA DIDAIMREQA GFRMGPFELM DLTGLDVSHP
VMESVYRQFY DEPRYRPSQI TALRFAGSIL GRKTGEGFYR YPEGQKQVPA EAPAPSARPS
SVWISRAHDA GHAAAQRLLL DLGITPEGGS KPSADALIIV TPRGLDATAC VTAEGLDARR
TVALDTLYPF AATKRRTLMT TPATDAAYRD AAHGLLASDG VPVTVIRDSG GFVAQRIVAC
IVNIACDIAQ QRIATPTDID LAVTLGLGYP KGPLALGDTL GTNAILEVLQ NLYALYGDPR
YRPSPWLLRR ARLGMSLLTP DA
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