Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2153 |
Symbol | |
ID | 6286694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2265000 |
End bp | 2265986 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642625724 |
Product | malate dehydrogenase |
Protein accession | YP_001899719 |
Protein GI | 187929232 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.266134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG CACCCATGCG CGTCGCAGTG ACCGGCGCTG CTGGACAGAT CGGTTACGCC CTACTGTTCC GCATCGCCGC CGGCGAAATG CTGGGCAAGG ATCAGCCCGT CATCCTGCAA CTGCTGGAAA TCCCCGATGA GAAGGCCCAG AAGGCGCTCA AGGGTGTGAT GATGGAGATC GAAGACTGCG CCTTCCCGCT GCTGGCTGGC ATGCAAGCGC ATTCCGACCC GATGACCGCG TTCAAGGACG TCGACGTGGC CCTGCTGGTG GGCGCCCGCC CCCGCGGCCC GGGCATGGAG CGCGCGGACC TGCTGTCGGC CAACGCCCAG ATCTTCACGG CGCAAGGCAG GGCACTCAAC GCCGTTGCCT CGCGCAACGT GAAGGTGCTG GTGGTCGGCA ACCCGGCCAA CACCAACGCC TACATCGCCA TGAAGTCGGC GCCGGACCTG CCGCGCGAGA ACTTCACCGC CATGCTGCGC CTGGACCACA ACCGCGCCCT GTCGCAGATC GCCGCCAAGA CCGGCAAGCC CGTGTCGAGC ATCGAAAAGC TGTTCGTGTG GGGCAACCAC AGCCCGACGA TGTACGCCGA CTACCGCTAC GCCACCATCG ACGGCAAGAG CGTCAAGGAC ATGATCAACG ACCCGGTGTG GAACAACGAC GTGTTCCTGC CGACCGTTGG CAAGCGCGGC GCCGCCATCA TCGAAGCGCG CGGGCTGTCG TCGGCGGCTT CGGCTGCCAA TGCCGCCATC GACCACGTGC GTGACTGGGT GCTCGGTACC AACGGCAAGA TCGTCACGAT GGGCATCCCG TCGAACGGCG AATACGGCAT TCCGAAGGAC GTGATGTTCG GCTTCCCGGT CACCACCGAG AACGGCAAGT ACAAGATCGT CGAAGGCCTG GAAATCGACG AGTACAGCCA AGGCAAGATC AAGATCACGC TCGACGAGCT GGAAGGCGAG CGTGCAGGCG TGCAGCATCT GCTGTAA
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Protein sequence | MAKAPMRVAV TGAAGQIGYA LLFRIAAGEM LGKDQPVILQ LLEIPDEKAQ KALKGVMMEI EDCAFPLLAG MQAHSDPMTA FKDVDVALLV GARPRGPGME RADLLSANAQ IFTAQGRALN AVASRNVKVL VVGNPANTNA YIAMKSAPDL PRENFTAMLR LDHNRALSQI AAKTGKPVSS IEKLFVWGNH SPTMYADYRY ATIDGKSVKD MINDPVWNND VFLPTVGKRG AAIIEARGLS SAASAANAAI DHVRDWVLGT NGKIVTMGIP SNGEYGIPKD VMFGFPVTTE NGKYKIVEGL EIDEYSQGKI KITLDELEGE RAGVQHLL
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