Gene Rpic_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2146 
SymbolgltA 
ID6286229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2258491 
End bp2259792 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content59% 
IMG OID642625717 
Producttype II citrate synthase 
Protein accessionYP_001899712 
Protein GI187929225 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGT CCGAAGTGAA AGCCACCCTA TCGTTTTCCG ATGGCTCGCC CAGCGTCGAG 
CTGCCGATCT ACAAGGGCAC GGTTGGCCCG GACGTGATCG ACATCCGCAA GCTGTACGGT
CAGACGGGCA AGTTCACGTA CGACCCCGGC TTCATGTCGA CTGCGTCGTG CAATTCCAAG
ATCACCTACA TCGATGGTGA CAAAGGTGAG CTGCTGTACC GCGGCTACGC CATCGACGAT
TTGGCCAGCA AGTGCGATTT CATGGAAATC TGCTATCTGC TGCTGAAGGG CGAGCTGCCC
AACGCCAAGC AGAAGGAAGA GTTCAACCAT GTGGTGACGA ATCACACCAT GGTCCACGAG
CAGATGCAGT TCTTCCTGCG CGGTTTCCGT CGTGACGCCC ACCCGATGGC CGTGCTGACG
GGTTTGGTTG GTGCCATGAG CGCGTTCTAT CCGGACGCTG CCAACATCAA TGATCCGCGC
GAGCGTGAAA TCTCGCAGAT CCGCTTGATC GCCAAGCTGC CGACGCTGGT GGCCATGGCA
TACAAGTACA ACATCGGCCA GCCGCTCATC TACCCGCAGA ACAACCTGTC GTACACGGGC
AATTTCATGC GCATGATGTT TGCCACGCCG TGCGAGGACT ACAAGGTGAA CCCGGTGCTG
GAGAAGGCAC TGGACCGCAT CTTCATCCTG CACGCAGACC ACGAGCAGAA CGCCTCGACG
TCGACGGTGC GTCTGGCGGG CTCGTCGGGC ACCAACCCGA TCGCAGCCAT CGCTGCCGGT
ATCGCCTGCC TGTGGGGCCC GGCGCACGGT GGCGCGAACG AAGCTGCGCT GAACATGCTG
GAAGAAATCG GTACCGTGGA CAAGGTGCCC GAGTTCATCA AGCAGGTGAA GGACAAGAAC
AGCGGCGTGC GCCTGATGGG CTTTGGTCAC CGCGTGTACA AGAACTACGA TCCGCGCGCC
AAGCTGATGC GGGAAACCTG CCACGAAGTG CTGAATGAGC TGGGTCTGCA TAACGACCCG
CTGTTCAAGC TGGCGATGGA GCTGGAAAAG ATTGCCCTGG AAGACGAGTA CTTCGTCAGC
CGCAAGCTGT ATCCGAACGT CGATTTCTAC TCGGGTATCG TGCAACGCGC GCTGGGCATC
CCGACTTCGA TGTTCACCTG TATCTTCGCG CTGGCCCGCT CGGTGGGCTG GATCTCGCAA
TGGGAAGAGA TGATCACCGA TCCGGAATAC AAGATCGGCC GTCCGCGCCA GCTGTTCAAC
GGTGCAGCCA CCCGCGAAGT GCCGTCGATC GACAAGCGCT AA
 
Protein sequence
MTPSEVKATL SFSDGSPSVE LPIYKGTVGP DVIDIRKLYG QTGKFTYDPG FMSTASCNSK 
ITYIDGDKGE LLYRGYAIDD LASKCDFMEI CYLLLKGELP NAKQKEEFNH VVTNHTMVHE
QMQFFLRGFR RDAHPMAVLT GLVGAMSAFY PDAANINDPR EREISQIRLI AKLPTLVAMA
YKYNIGQPLI YPQNNLSYTG NFMRMMFATP CEDYKVNPVL EKALDRIFIL HADHEQNAST
STVRLAGSSG TNPIAAIAAG IACLWGPAHG GANEAALNML EEIGTVDKVP EFIKQVKDKN
SGVRLMGFGH RVYKNYDPRA KLMRETCHEV LNELGLHNDP LFKLAMELEK IALEDEYFVS
RKLYPNVDFY SGIVQRALGI PTSMFTCIFA LARSVGWISQ WEEMITDPEY KIGRPRQLFN
GAATREVPSI DKR