Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2145 |
Symbol | |
ID | 6286228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2256857 |
End bp | 2258266 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642625716 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_001899711 |
Protein GI | 187929224 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA CGCTCTACGA CAAACTTTGG GACGATCACG TCGTTCATAC CGAAGAAGAC GGCACGACCG TCCTCTACAT CGATCGTCAA CTGCTGCATG AAGTGACGAG CCCGCAGGCA TTCGAGGGCC TGAAGTTAGC CGAGCGTCCG GTGTGGCGCA TCAGCGCAAA CCTGGCCGTG TCGGATCACA ACGTGCCGAC CACCGATCGT TCGCACGGCA TTGCCGATCC GGTTTCGAAG CTGCAAGTCG ATACGCTTGA TGCCAACTGC GACAGCTACG GCATCACGCA ATTCAAGATG AACGACAAGC GCCAGGGCAT CGTGCACGTG ATCGGGCCGG AGCAGGGCGC GACGCTGCCG GGCATGACGG TGGTCTGCGG TGATTCGCAC ACCAGCACGC ACGGTGCGTT CGGCGCGCTC GCGCACGGCA TCGGCACCTC GGAAGTCGAG CACGTGCTGG CCACGCAAAC GCTGCTCACC AAGAAGAGCA AGAACATGCT GGTGAAGGTG GAAGGTACGC TGCCTCGCGG CTGCACGGCC AAGGACATCG TGCTCGCCAT CATCGGCAAG ATCGGTACGG CCGGTGGCAC GGGCTACGCC ATGGAATTCG GCGGCTCGGC CATCCGCGCG CTGTCGATGG AAGGCCGCAT GACGGTGTGC AACATGGCAA TCGAGGCAGG CGCCCGCGCC GGCATCGTCG CCGTGGACGA TGTCACGCTG GAGTACATCA AGGGCCGTCC GTTCGCGCCG CAAGGCGTGG AGTGGGAGCA GGCCGTCGCC TACTGGCGCA CGCTGCATTC CGACGAGGGT GCGCACTTCG ACCAGGTGAT CGAACTGCGT GCTGAAGACA TTCGCCCGCA GGTGAGCTGG GGGACATCGC CGGAAATGGT GGTCAGCATT GAAGACCGCG TGCCGGATCC CGACAAAGAG AAAGACCCGA ACAAGCGCAA CGCCATGGAG CGCGCGCTCG AGTACATGGG CCTGCAGCCG AACGTCGCCA TCAGCGACAT CAACATCGAC AAGGTGTTCA TCGGCTCGTG CACCAACAGC CGCATCGAAG ACATGCGCGC CGCGGCGTGG GTCGTGCAGA AGCTGGGCAA GCGCATTGCG TCGAACGTGA AGCTGGCGAT GGTCGTGCCG GGCTCGGGCC TCGTGAAGGA GCAGGCCGAG CGCGAAGGGC TCGACAAGAT CTTCAAGGCG GCGGGCTTTG AGTGGCGCGA GCCGGGTTGC TCGATGTGTC TCGCCATGAA CGCTGACCGC CTCGAGCCGG GCGAACGCTG CGCGTCCACG TCCAACCGCA ACTTCGAAGG CCGTCAGGGC GCGGGCGGAC GCACCCACCT GGTAAGCCCG GCGATGGCCG CTGCGGCCGC GCTGGAAGGC CACTTCGTCG ACGTGCGCAA GCTCGCTTGA
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Protein sequence | MAKTLYDKLW DDHVVHTEED GTTVLYIDRQ LLHEVTSPQA FEGLKLAERP VWRISANLAV SDHNVPTTDR SHGIADPVSK LQVDTLDANC DSYGITQFKM NDKRQGIVHV IGPEQGATLP GMTVVCGDSH TSTHGAFGAL AHGIGTSEVE HVLATQTLLT KKSKNMLVKV EGTLPRGCTA KDIVLAIIGK IGTAGGTGYA MEFGGSAIRA LSMEGRMTVC NMAIEAGARA GIVAVDDVTL EYIKGRPFAP QGVEWEQAVA YWRTLHSDEG AHFDQVIELR AEDIRPQVSW GTSPEMVVSI EDRVPDPDKE KDPNKRNAME RALEYMGLQP NVAISDINID KVFIGSCTNS RIEDMRAAAW VVQKLGKRIA SNVKLAMVVP GSGLVKEQAE REGLDKIFKA AGFEWREPGC SMCLAMNADR LEPGERCAST SNRNFEGRQG AGGRTHLVSP AMAAAAALEG HFVDVRKLA
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