| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2128 |
|---|
| Symbol | |
|---|
| ID | 6289187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2238528 |
|---|
| End bp | 2239490 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642625699 |
|---|
| Product | nodulation ABC transporter NodI |
|---|
| Protein accession | YP_001899694 |
|---|
| Protein GI | 187929207 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.226763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGATACG AGCAAGAGGG TTTTGGCGTG GGCAGCACAC CGATCCTGAG CGTCGAAGGC
CTGCGCAAAC GTTACGGCGA ACAGACTGTC GTCGACAACC TCAGCTTCAG CGTTCGGCGC
GGCCAGTGCT TCGGCCTGCT GGGCCCCAAC GGCGCCGGCA AGACCACCAC GCTGCGCATG
CTGCTCGGCA TGACGATGCC CGATGCGGGT AGCCTGAGAC TGTGCGACGA GCCTGTCCCG
GAAGCCGCAC ATCGTGCACG CATGCGCGTG GGCGTGGTGC CGCAGTTCGA CAATCTCGAT
CCAGACTTCT CCGTCTCCGA AAACCTGCGC ATCTTCGGTC GCTACTTTGG CCTGTCTTCC
GCGACCATCC GCGAGCGCAT CCCCACCTTG CTGGAGTTCG CGCGTCTCGA ACAGAAAGCC
GATGCTCCTG TACGCGCCCT CTCGGGCGGC ATGAAACGGC GGCTGACGGT AGCGCGCGCC
CTGATCAACG ATCCCGACAT CCTCGTCATG GACGAGCCCA CCACGGGGCT CGACCCGCAG
GCTCGACACC TGATCTGGGA ACGCCTGCGC TCACTGCTCG CCGCCGGCAA GACCATCCTG
CTGACCACGC ATTTCATGGA AGAAGCCGAG CGCCTGTGCG ATGAACTTTG CGTGATCGAC
AACGGCCGCA AGATCGCGCA AGGCAAGCCG CAAGACCTCA TCGCACGCGA AATCGGCTGC
GACGTTGTTG AGGTCTACGG CGACGATCTC AACGCCCTTC GCACGCTGCT CACGCCGCTG
GCCGACCGCG TGGAAATCAG CGGCGAGACG CTCTTCTGCT ACGCACGCGA TCCGCAGCCG
CTGGTGGCTG CGCTGCGCGC ACAGGCAGAA ACGCACACCA TGCCCGGCCT GCGCTATCTG
CACCGCCCGG CCAATCTCGA AGATGTGTTC CTGCGCCTGA CTGGCCGCGA AATGCGCGAC
TGA
|
|---|
| Protein sequence | MRYEQEGFGV GSTPILSVEG LRKRYGEQTV VDNLSFSVRR GQCFGLLGPN GAGKTTTLRM
LLGMTMPDAG SLRLCDEPVP EAAHRARMRV GVVPQFDNLD PDFSVSENLR IFGRYFGLSS
ATIRERIPTL LEFARLEQKA DAPVRALSGG MKRRLTVARA LINDPDILVM DEPTTGLDPQ
ARHLIWERLR SLLAAGKTIL LTTHFMEEAE RLCDELCVID NGRKIAQGKP QDLIAREIGC
DVVEVYGDDL NALRTLLTPL ADRVEISGET LFCYARDPQP LVAALRAQAE THTMPGLRYL
HRPANLEDVF LRLTGREMRD
|
|---|
| |