Gene Rpic_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2120 
Symbol 
ID6288505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2234714 
End bp2235127 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content63% 
IMG OID642625691 
Productprotein of unknown function DUF336 
Protein accessionYP_001899686 
Protein GI187929199 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.309036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA AACCGTGCCT GTGCCAGGAC GATGTCACCA AAATCCTGGA CGCTGCCGAG 
AAAGAAGCGC GCGCGCACCA ATGGAACGTG ACGATTGCCG TGGTGGACGA TGGCGGCCAT
CTGATGGGTC TGCGCCGCAT GGACGGCTGC GCCACCATCT CGGCGTACAT CGCCCCGGAA
AAGGCGCGTA CGGCAGCGCT GGGCCGTCGC GAGTCGAAGA TCTACGAAGA CATCGTCAAC
AACGGTCGCA TCTCGTTCCT GTCGGCGCCG CATCTGCAAG GGATGCTTGA GGGCGGCGTG
CCGGTGATGG TAGAGGGCGT CTGTGCCGGC GCGGTGGGTG TGTCTGGCGT GAAGTCGACG
GAAGATGTCG TGATCGCCAA GGCGGGTATT GCCGCGGTGA ACGTGATCTG CTGA
 
Protein sequence
MKTKPCLCQD DVTKILDAAE KEARAHQWNV TIAVVDDGGH LMGLRRMDGC ATISAYIAPE 
KARTAALGRR ESKIYEDIVN NGRISFLSAP HLQGMLEGGV PVMVEGVCAG AVGVSGVKST
EDVVIAKAGI AAVNVIC