Gene Rpic_2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2114 
Symbol 
ID6286829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2227880 
End bp2229160 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content67% 
IMG OID642625685 
Productputative transmembrane protein 
Protein accessionYP_001899680 
Protein GI187929193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.868258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.68742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACCG CCCCCACGCT GTTCTACGAA CGCATGCCGC CTGCCGGCGT GGTGTTCGGC 
TGCCTGCTGC CAGTGCCGTG GGTGGGCGCG GCGGCCGGTC TTCTGCTGGC GCTGGGCCCG
TCTGCGGGTT TGCCTGACCG ATTTGCTCCG CTGTCGCTCG CGCTGGTTCA CGCCTTGGTC
GTCGGCATGT TATTGCCGGC GATGCTTGGT GCGCTATTTC AATTGCTTCC CGTGGTGGCC
GGTGTGCCTG TGCGCGGCGC GAAATGGGCG TCGCCTTGGG TTGCGCTCTC ATGCGTGGCA
ACGGCATCTG CGCTTGCAAC GGGTTTCCTG GGCGCGGACC ATCGTGCGTT CGTGCTGGCT
GCTTGGTTGG GTGCGCCGCT GTTGGCGGTC CCTGCTGCGT TGATCATCCT TGCTGGCATG
CGCGTGGGGC AGACACGCGC AACGCATGCG ACGGTGCGGA CACTGCGCCG CATCGGTTGG
CCCTTGTTGG TCACGCTGGC GAGCGGCGCA ACGCTTGGCA CGGCATTGGC TAGCGGATGG
TTTGCGCCAT CGCCCGTGCT GTTGAACCTG CATGTCGGTT GGGGCCTCGG CGGCTGGCTG
GCAACGTTGG TCGCGGGCGT GGCGTCGACG GTGTTGCCGA TGTTCTGGCA GACGCGGCGT
CTACCTGAGC CTTGGCATCG GCTGATGCCG TGGTGGCTGT GGGCGCCACT GACCGTTGGC
AGTCTATGCA GCGGTGTGGG TGGCGCGGTG TTCTGGCAGA CATGGGGATG GCTCGCCCTG
GCAGCGCTGG CGCTGGTGGG CGTGCGTGCA GTGTGCAGCG CGCGTCGCCG GCACGATCCG
GGCTGGCGGT TGTGGCTGGC CGCTGCCGTC GCCTGGCTGG TCGTTGCCAT GCTGGGGCTG
ACCGCATCCT GGCTGCCGTC AGACTGGCCC ATCACGTGGG AGATCGGCGC GCTGGCCGTC
GTGGGCGGTG GGGTGCTGCC TGTCAATGCG ATGCTTGGCA AGATCATCCC GTTCATGATC
TGGATGCACC TGCGCAGGCG GGTGCCGCGG CATGTGCGGC TGCCGGCCAT GCAAACGTTG
ATCGGTGAGC GGCAACAGCA TTGGCATGCA CGCCTGCTGC TGCTCGTATT GTTGGCGTTG
TTGCTGGTGC CGCTGCATCC TGAGCGGATG GCGGTGGTCG CGGGCCTGCT GTTCGCGCTG
TCGCACGTGT GGCTGGGTGC GATGCTGTGC CGGGCGCTGC TGACGTTTCG CCGTGTCTCG
CGAGCGTTTG CGCCCGCTTG A
 
Protein sequence
MPTAPTLFYE RMPPAGVVFG CLLPVPWVGA AAGLLLALGP SAGLPDRFAP LSLALVHALV 
VGMLLPAMLG ALFQLLPVVA GVPVRGAKWA SPWVALSCVA TASALATGFL GADHRAFVLA
AWLGAPLLAV PAALIILAGM RVGQTRATHA TVRTLRRIGW PLLVTLASGA TLGTALASGW
FAPSPVLLNL HVGWGLGGWL ATLVAGVAST VLPMFWQTRR LPEPWHRLMP WWLWAPLTVG
SLCSGVGGAV FWQTWGWLAL AALALVGVRA VCSARRRHDP GWRLWLAAAV AWLVVAMLGL
TASWLPSDWP ITWEIGALAV VGGGVLPVNA MLGKIIPFMI WMHLRRRVPR HVRLPAMQTL
IGERQQHWHA RLLLLVLLAL LLVPLHPERM AVVAGLLFAL SHVWLGAMLC RALLTFRRVS
RAFAPA